Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rpa1Q8VEE4 App-207ENSMUST00000227737 2827 ntBASIC16.28■□□□□ 0.2
Rpa1Q8VEE4 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Rpa1Q8VEE4 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rpa1Q8VEE4 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rpa1Q8VEE4 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rpa1Q8VEE4 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Rpa1Q8VEE4 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
Rpa1Q8VEE4 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rpa1Q8VEE4 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rpa1Q8VEE4 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC16.28■□□□□ 0.2
Rpa1Q8VEE4 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rpa1Q8VEE4 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rpa1Q8VEE4 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rpa1Q8VEE4 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rpa1Q8VEE4 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Rpa1Q8VEE4 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rpa1Q8VEE4 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rpa1Q8VEE4 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Rpa1Q8VEE4 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Rpa1Q8VEE4 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rpa1Q8VEE4 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Rpa1Q8VEE4 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rpa1Q8VEE4 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rpa1Q8VEE4 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rpa1Q8VEE4 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rpa1Q8VEE4 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rpa1Q8VEE4 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rpa1Q8VEE4 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rpa1Q8VEE4 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Rpa1Q8VEE4 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rpa1Q8VEE4 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rpa1Q8VEE4 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rpa1Q8VEE4 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Rpa1Q8VEE4 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Rpa1Q8VEE4 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC16.27■□□□□ 0.2
Rpa1Q8VEE4 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC16.27■□□□□ 0.2
Rpa1Q8VEE4 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rpa1Q8VEE4 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Rpa1Q8VEE4 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rpa1Q8VEE4 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rpa1Q8VEE4 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Rpa1Q8VEE4 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Rpa1Q8VEE4 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Rpa1Q8VEE4 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Rpa1Q8VEE4 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Rpa1Q8VEE4 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Rpa1Q8VEE4 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Rpa1Q8VEE4 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC16.27■□□□□ 0.19
Rpa1Q8VEE4 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rpa1Q8VEE4 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC16.26■□□□□ 0.19
Rpa1Q8VEE4 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rpa1Q8VEE4 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC16.26■□□□□ 0.19
Rpa1Q8VEE4 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rpa1Q8VEE4 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rpa1Q8VEE4 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC16.26■□□□□ 0.19
Rpa1Q8VEE4 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rpa1Q8VEE4 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rpa1Q8VEE4 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rpa1Q8VEE4 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC16.26■□□□□ 0.19
Rpa1Q8VEE4 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Rpa1Q8VEE4 Gm18958-201ENSMUST00000174258 762 ntBASIC16.26■□□□□ 0.19
Rpa1Q8VEE4 Gm27275-201ENSMUST00000184318 272 ntBASIC16.26■□□□□ 0.19
Rpa1Q8VEE4 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rpa1Q8VEE4 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC16.26■□□□□ 0.19
Rpa1Q8VEE4 Gfra2-202ENSMUST00000227633 1480 ntBASIC16.26■□□□□ 0.19
Rpa1Q8VEE4 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Rpa1Q8VEE4 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rpa1Q8VEE4 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rpa1Q8VEE4 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Rpa1Q8VEE4 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC16.26■□□□□ 0.19
Rpa1Q8VEE4 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Rpa1Q8VEE4 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rpa1Q8VEE4 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rpa1Q8VEE4 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rpa1Q8VEE4 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rpa1Q8VEE4 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rpa1Q8VEE4 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rpa1Q8VEE4 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC16.25■□□□□ 0.19
Rpa1Q8VEE4 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rpa1Q8VEE4 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rpa1Q8VEE4 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rpa1Q8VEE4 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rpa1Q8VEE4 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rpa1Q8VEE4 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rpa1Q8VEE4 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rpa1Q8VEE4 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rpa1Q8VEE4 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Rpa1Q8VEE4 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rpa1Q8VEE4 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rpa1Q8VEE4 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC16.25■□□□□ 0.19
Rpa1Q8VEE4 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rpa1Q8VEE4 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Rpa1Q8VEE4 AC120002.2-201ENSMUST00000220205 773 ntBASIC16.25■□□□□ 0.19
Rpa1Q8VEE4 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rpa1Q8VEE4 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rpa1Q8VEE4 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Rpa1Q8VEE4 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rpa1Q8VEE4 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Rpa1Q8VEE4 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms