Protein–RNA interactions for Protein: Q8VE18

Smg8, Protein SMG8, mousemouse

Predictions only

Length 991 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg8Q8VE18 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Smg8Q8VE18 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smg8Q8VE18 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC17.14■□□□□ 0.33
Smg8Q8VE18 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC17.14■□□□□ 0.33
Smg8Q8VE18 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smg8Q8VE18 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smg8Q8VE18 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Smg8Q8VE18 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smg8Q8VE18 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smg8Q8VE18 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smg8Q8VE18 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smg8Q8VE18 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC17.14■□□□□ 0.33
Smg8Q8VE18 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smg8Q8VE18 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC17.14■□□□□ 0.33
Smg8Q8VE18 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smg8Q8VE18 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Smg8Q8VE18 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Smg8Q8VE18 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Smg8Q8VE18 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC17.14■□□□□ 0.33
Smg8Q8VE18 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Smg8Q8VE18 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Smg8Q8VE18 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smg8Q8VE18 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Smg8Q8VE18 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smg8Q8VE18 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smg8Q8VE18 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smg8Q8VE18 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smg8Q8VE18 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smg8Q8VE18 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smg8Q8VE18 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC17.14■□□□□ 0.33
Smg8Q8VE18 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smg8Q8VE18 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smg8Q8VE18 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Smg8Q8VE18 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Smg8Q8VE18 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Smg8Q8VE18 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smg8Q8VE18 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smg8Q8VE18 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smg8Q8VE18 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC17.13■□□□□ 0.33
Smg8Q8VE18 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Smg8Q8VE18 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC17.13■□□□□ 0.33
Smg8Q8VE18 AC154757.1-201ENSMUST00000228289 336 ntBASIC17.13■□□□□ 0.33
Smg8Q8VE18 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smg8Q8VE18 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smg8Q8VE18 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Smg8Q8VE18 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smg8Q8VE18 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smg8Q8VE18 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smg8Q8VE18 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smg8Q8VE18 AC154527.4-201ENSMUST00000224364 1667 ntBASIC17.13■□□□□ 0.33
Smg8Q8VE18 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smg8Q8VE18 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Smg8Q8VE18 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smg8Q8VE18 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smg8Q8VE18 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
Smg8Q8VE18 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smg8Q8VE18 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smg8Q8VE18 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Smg8Q8VE18 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smg8Q8VE18 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
Smg8Q8VE18 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smg8Q8VE18 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smg8Q8VE18 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Smg8Q8VE18 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
Smg8Q8VE18 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Smg8Q8VE18 Gm5712-201ENSMUST00000199748 1043 ntBASIC17.12■□□□□ 0.33
Smg8Q8VE18 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smg8Q8VE18 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC17.12■□□□□ 0.33
Smg8Q8VE18 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smg8Q8VE18 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smg8Q8VE18 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smg8Q8VE18 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smg8Q8VE18 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
Smg8Q8VE18 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Smg8Q8VE18 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smg8Q8VE18 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Smg8Q8VE18 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smg8Q8VE18 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smg8Q8VE18 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smg8Q8VE18 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smg8Q8VE18 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC17.11■□□□□ 0.33
Smg8Q8VE18 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC17.11■□□□□ 0.33
Smg8Q8VE18 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC17.11■□□□□ 0.33
Smg8Q8VE18 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC17.11■□□□□ 0.33
Smg8Q8VE18 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC17.11■□□□□ 0.33
Smg8Q8VE18 Gm18622-201ENSMUST00000219361 595 ntBASIC17.11■□□□□ 0.33
Smg8Q8VE18 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smg8Q8VE18 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smg8Q8VE18 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smg8Q8VE18 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Smg8Q8VE18 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Smg8Q8VE18 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smg8Q8VE18 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC17.11■□□□□ 0.33
Smg8Q8VE18 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smg8Q8VE18 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC17.11■□□□□ 0.33
Smg8Q8VE18 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smg8Q8VE18 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smg8Q8VE18 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Smg8Q8VE18 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smg8Q8VE18 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms