Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Lsm1Q8VC85 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Lsm1Q8VC85 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC15.49■□□□□ 0.07
Lsm1Q8VC85 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC15.49■□□□□ 0.07
Lsm1Q8VC85 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Lsm1Q8VC85 Gm43799-201ENSMUST00000201845 579 ntBASIC15.49■□□□□ 0.07
Lsm1Q8VC85 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Lsm1Q8VC85 Gm18959-201ENSMUST00000208954 655 ntBASIC15.49■□□□□ 0.07
Lsm1Q8VC85 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Lsm1Q8VC85 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Lsm1Q8VC85 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Lsm1Q8VC85 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Lsm1Q8VC85 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Lsm1Q8VC85 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Lsm1Q8VC85 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Lsm1Q8VC85 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Lsm1Q8VC85 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Lsm1Q8VC85 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Lsm1Q8VC85 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Lsm1Q8VC85 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Lsm1Q8VC85 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Lsm1Q8VC85 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Lsm1Q8VC85 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Lsm1Q8VC85 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Lsm1Q8VC85 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Lsm1Q8VC85 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Lsm1Q8VC85 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Lsm1Q8VC85 Ccdc166-201ENSMUST00000182172 2584 ntBASIC15.48■□□□□ 0.07
Lsm1Q8VC85 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Lsm1Q8VC85 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Lsm1Q8VC85 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Lsm1Q8VC85 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Lsm1Q8VC85 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Lsm1Q8VC85 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Lsm1Q8VC85 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC15.48■□□□□ 0.07
Lsm1Q8VC85 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC15.48■□□□□ 0.07
Lsm1Q8VC85 AC122351.1-201ENSMUST00000220467 126 ntBASIC15.48■□□□□ 0.07
Lsm1Q8VC85 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Lsm1Q8VC85 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC15.48■□□□□ 0.07
Lsm1Q8VC85 Gm44616-201ENSMUST00000206417 1732 ntBASIC15.48■□□□□ 0.07
Lsm1Q8VC85 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Lsm1Q8VC85 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Lsm1Q8VC85 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Lsm1Q8VC85 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Lsm1Q8VC85 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Lsm1Q8VC85 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Lsm1Q8VC85 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Lsm1Q8VC85 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Lsm1Q8VC85 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Lsm1Q8VC85 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Lsm1Q8VC85 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Lsm1Q8VC85 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Lsm1Q8VC85 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Lsm1Q8VC85 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Lsm1Q8VC85 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Lsm1Q8VC85 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC15.47■□□□□ 0.07
Lsm1Q8VC85 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC15.47■□□□□ 0.07
Lsm1Q8VC85 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Lsm1Q8VC85 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Lsm1Q8VC85 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Lsm1Q8VC85 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Lsm1Q8VC85 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Lsm1Q8VC85 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Lsm1Q8VC85 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Lsm1Q8VC85 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Lsm1Q8VC85 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Lsm1Q8VC85 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Lsm1Q8VC85 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC15.47■□□□□ 0.07
Lsm1Q8VC85 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Lsm1Q8VC85 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Lsm1Q8VC85 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC15.46■□□□□ 0.07
Lsm1Q8VC85 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Lsm1Q8VC85 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Lsm1Q8VC85 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Lsm1Q8VC85 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Lsm1Q8VC85 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Lsm1Q8VC85 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Lsm1Q8VC85 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Lsm1Q8VC85 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Lsm1Q8VC85 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Lsm1Q8VC85 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Lsm1Q8VC85 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC15.46■□□□□ 0.07
Lsm1Q8VC85 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC15.46■□□□□ 0.07
Lsm1Q8VC85 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Lsm1Q8VC85 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC15.46■□□□□ 0.07
Lsm1Q8VC85 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Lsm1Q8VC85 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Lsm1Q8VC85 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Lsm1Q8VC85 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Lsm1Q8VC85 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC15.46■□□□□ 0.06
Lsm1Q8VC85 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.06
Lsm1Q8VC85 Gm9867-201ENSMUST00000192212 2647 ntBASIC15.46■□□□□ 0.06
Lsm1Q8VC85 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.06
Lsm1Q8VC85 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.06
Lsm1Q8VC85 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Lsm1Q8VC85 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Lsm1Q8VC85 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC15.45■□□□□ 0.06
Lsm1Q8VC85 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Lsm1Q8VC85 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Lsm1Q8VC85 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms