Protein–RNA interactions for Protein: Q8VC34

Rpap2, Putative RNA polymerase II subunit B1 CTD phosphatase Rpap2, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap2Q8VC34 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rpap2Q8VC34 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
Rpap2Q8VC34 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC17.71■□□□□ 0.43
Rpap2Q8VC34 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.42
Rpap2Q8VC34 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rpap2Q8VC34 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rpap2Q8VC34 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC17.7■□□□□ 0.42
Rpap2Q8VC34 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rpap2Q8VC34 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC17.7■□□□□ 0.42
Rpap2Q8VC34 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC17.7■□□□□ 0.42
Rpap2Q8VC34 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC17.7■□□□□ 0.42
Rpap2Q8VC34 Mir6404-201ENSMUST00000183699 94 ntBASIC17.7■□□□□ 0.42
Rpap2Q8VC34 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rpap2Q8VC34 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC17.7■□□□□ 0.42
Rpap2Q8VC34 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rpap2Q8VC34 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rpap2Q8VC34 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC17.7■□□□□ 0.42
Rpap2Q8VC34 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Rpap2Q8VC34 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rpap2Q8VC34 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Rpap2Q8VC34 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rpap2Q8VC34 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rpap2Q8VC34 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Rpap2Q8VC34 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rpap2Q8VC34 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rpap2Q8VC34 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rpap2Q8VC34 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rpap2Q8VC34 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rpap2Q8VC34 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Rpap2Q8VC34 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rpap2Q8VC34 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rpap2Q8VC34 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Rpap2Q8VC34 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Rpap2Q8VC34 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC17.69■□□□□ 0.42
Rpap2Q8VC34 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Rpap2Q8VC34 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC17.69■□□□□ 0.42
Rpap2Q8VC34 Mir3081-201ENSMUST00000175305 84 ntBASIC17.69■□□□□ 0.42
Rpap2Q8VC34 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Rpap2Q8VC34 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC17.69■□□□□ 0.42
Rpap2Q8VC34 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Rpap2Q8VC34 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rpap2Q8VC34 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rpap2Q8VC34 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rpap2Q8VC34 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rpap2Q8VC34 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Rpap2Q8VC34 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rpap2Q8VC34 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Rpap2Q8VC34 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Rpap2Q8VC34 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rpap2Q8VC34 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rpap2Q8VC34 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rpap2Q8VC34 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rpap2Q8VC34 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC17.68■□□□□ 0.42
Rpap2Q8VC34 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC17.68■□□□□ 0.42
Rpap2Q8VC34 Gm14859-201ENSMUST00000117752 357 ntBASIC17.68■□□□□ 0.42
Rpap2Q8VC34 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC17.68■□□□□ 0.42
Rpap2Q8VC34 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC17.68■□□□□ 0.42
Rpap2Q8VC34 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC17.68■□□□□ 0.42
Rpap2Q8VC34 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rpap2Q8VC34 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Rpap2Q8VC34 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rpap2Q8VC34 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Rpap2Q8VC34 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Rpap2Q8VC34 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rpap2Q8VC34 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rpap2Q8VC34 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rpap2Q8VC34 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rpap2Q8VC34 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC17.67■□□□□ 0.42
Rpap2Q8VC34 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
Rpap2Q8VC34 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rpap2Q8VC34 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC17.67■□□□□ 0.42
Rpap2Q8VC34 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC17.67■□□□□ 0.42
Rpap2Q8VC34 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rpap2Q8VC34 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
Rpap2Q8VC34 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rpap2Q8VC34 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rpap2Q8VC34 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rpap2Q8VC34 Rprl3-201ENSMUST00000157400 290 ntBASIC17.67■□□□□ 0.42
Rpap2Q8VC34 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC17.67■□□□□ 0.42
Rpap2Q8VC34 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rpap2Q8VC34 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rpap2Q8VC34 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC17.67■□□□□ 0.42
Rpap2Q8VC34 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rpap2Q8VC34 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Rpap2Q8VC34 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rpap2Q8VC34 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rpap2Q8VC34 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rpap2Q8VC34 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rpap2Q8VC34 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rpap2Q8VC34 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rpap2Q8VC34 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rpap2Q8VC34 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rpap2Q8VC34 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rpap2Q8VC34 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rpap2Q8VC34 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Rpap2Q8VC34 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC17.66■□□□□ 0.42
Rpap2Q8VC34 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
Rpap2Q8VC34 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Rpap2Q8VC34 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rpap2Q8VC34 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms