Protein–RNA interactions for Protein: Q8R4U6

Top1mt, DNA topoisomerase I, mitochondrial, mousemouse

Predictions only

Length 593 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Top1mtQ8R4U6 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
Top1mtQ8R4U6 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Top1mtQ8R4U6 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC19.31■□□□□ 0.68
Top1mtQ8R4U6 Gm45328-201ENSMUST00000210942 917 ntBASIC19.31■□□□□ 0.68
Top1mtQ8R4U6 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Top1mtQ8R4U6 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Top1mtQ8R4U6 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Top1mtQ8R4U6 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Top1mtQ8R4U6 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Top1mtQ8R4U6 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Top1mtQ8R4U6 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Top1mtQ8R4U6 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Top1mtQ8R4U6 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Top1mtQ8R4U6 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Top1mtQ8R4U6 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Top1mtQ8R4U6 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Top1mtQ8R4U6 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Top1mtQ8R4U6 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC19.3■□□□□ 0.68
Top1mtQ8R4U6 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Top1mtQ8R4U6 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Top1mtQ8R4U6 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Top1mtQ8R4U6 Gm19430-201ENSMUST00000193847 2137 ntBASIC19.3■□□□□ 0.68
Top1mtQ8R4U6 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Top1mtQ8R4U6 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Top1mtQ8R4U6 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Top1mtQ8R4U6 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC19.3■□□□□ 0.68
Top1mtQ8R4U6 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Top1mtQ8R4U6 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Top1mtQ8R4U6 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
Top1mtQ8R4U6 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Top1mtQ8R4U6 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Top1mtQ8R4U6 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Top1mtQ8R4U6 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
Top1mtQ8R4U6 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Top1mtQ8R4U6 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Top1mtQ8R4U6 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Top1mtQ8R4U6 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Top1mtQ8R4U6 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Top1mtQ8R4U6 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Top1mtQ8R4U6 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Top1mtQ8R4U6 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC19.29■□□□□ 0.68
Top1mtQ8R4U6 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Top1mtQ8R4U6 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Top1mtQ8R4U6 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Top1mtQ8R4U6 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Top1mtQ8R4U6 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Top1mtQ8R4U6 Dancr-204ENSMUST00000132389 2347 ntBASIC19.29■□□□□ 0.68
Top1mtQ8R4U6 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Top1mtQ8R4U6 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Top1mtQ8R4U6 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Top1mtQ8R4U6 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Top1mtQ8R4U6 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Top1mtQ8R4U6 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Top1mtQ8R4U6 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Top1mtQ8R4U6 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Top1mtQ8R4U6 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Top1mtQ8R4U6 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Top1mtQ8R4U6 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Top1mtQ8R4U6 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Top1mtQ8R4U6 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Top1mtQ8R4U6 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Top1mtQ8R4U6 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Top1mtQ8R4U6 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Top1mtQ8R4U6 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC19.28■□□□□ 0.68
Top1mtQ8R4U6 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Top1mtQ8R4U6 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Top1mtQ8R4U6 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC19.28■□□□□ 0.68
Top1mtQ8R4U6 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Top1mtQ8R4U6 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Top1mtQ8R4U6 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
Top1mtQ8R4U6 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Top1mtQ8R4U6 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Top1mtQ8R4U6 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Top1mtQ8R4U6 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Top1mtQ8R4U6 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC19.28■□□□□ 0.68
Top1mtQ8R4U6 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Top1mtQ8R4U6 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Top1mtQ8R4U6 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Top1mtQ8R4U6 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Top1mtQ8R4U6 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Top1mtQ8R4U6 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Top1mtQ8R4U6 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Top1mtQ8R4U6 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Top1mtQ8R4U6 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Top1mtQ8R4U6 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Top1mtQ8R4U6 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Top1mtQ8R4U6 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Top1mtQ8R4U6 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Top1mtQ8R4U6 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Top1mtQ8R4U6 Gm15794-201ENSMUST00000120182 631 ntBASIC19.27■□□□□ 0.68
Top1mtQ8R4U6 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC19.27■□□□□ 0.68
Top1mtQ8R4U6 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
Top1mtQ8R4U6 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Top1mtQ8R4U6 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
Top1mtQ8R4U6 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Top1mtQ8R4U6 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Top1mtQ8R4U6 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC19.27■□□□□ 0.67
Top1mtQ8R4U6 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Top1mtQ8R4U6 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Top1mtQ8R4U6 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms