Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nup35Q8R4R6 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nup35Q8R4R6 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nup35Q8R4R6 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nup35Q8R4R6 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nup35Q8R4R6 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nup35Q8R4R6 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Nup35Q8R4R6 AC154412.1-201ENSMUST00000226540 2786 ntBASIC13.19□□□□□ -0.3
Nup35Q8R4R6 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nup35Q8R4R6 Gm27528-202ENSMUST00000222916 2012 ntBASIC13.19□□□□□ -0.3
Nup35Q8R4R6 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC13.19□□□□□ -0.3
Nup35Q8R4R6 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nup35Q8R4R6 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Nup35Q8R4R6 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nup35Q8R4R6 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nup35Q8R4R6 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Nup35Q8R4R6 Gm42901-201ENSMUST00000197735 3171 ntBASIC13.19□□□□□ -0.3
Nup35Q8R4R6 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nup35Q8R4R6 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC13.19□□□□□ -0.3
Nup35Q8R4R6 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nup35Q8R4R6 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Nup35Q8R4R6 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nup35Q8R4R6 Rbfox2-206ENSMUST00000227314 1810 ntBASIC13.18□□□□□ -0.3
Nup35Q8R4R6 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nup35Q8R4R6 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nup35Q8R4R6 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Nup35Q8R4R6 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC13.18□□□□□ -0.3
Nup35Q8R4R6 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Nup35Q8R4R6 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nup35Q8R4R6 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nup35Q8R4R6 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nup35Q8R4R6 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Nup35Q8R4R6 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Nup35Q8R4R6 Slc35b2-202ENSMUST00000223987 1766 ntBASIC13.18□□□□□ -0.3
Nup35Q8R4R6 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nup35Q8R4R6 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nup35Q8R4R6 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Nup35Q8R4R6 Trmt13-210ENSMUST00000198454 880 ntBASIC13.18□□□□□ -0.3
Nup35Q8R4R6 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC13.18□□□□□ -0.3
Nup35Q8R4R6 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC13.18□□□□□ -0.3
Nup35Q8R4R6 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nup35Q8R4R6 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nup35Q8R4R6 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nup35Q8R4R6 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC13.18□□□□□ -0.3
Nup35Q8R4R6 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nup35Q8R4R6 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nup35Q8R4R6 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nup35Q8R4R6 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC13.18□□□□□ -0.3
Nup35Q8R4R6 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC13.18□□□□□ -0.3
Nup35Q8R4R6 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC13.18□□□□□ -0.3
Nup35Q8R4R6 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nup35Q8R4R6 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nup35Q8R4R6 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nup35Q8R4R6 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nup35Q8R4R6 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nup35Q8R4R6 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC13.17□□□□□ -0.3
Nup35Q8R4R6 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Nup35Q8R4R6 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nup35Q8R4R6 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nup35Q8R4R6 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nup35Q8R4R6 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Nup35Q8R4R6 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Nup35Q8R4R6 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nup35Q8R4R6 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Nup35Q8R4R6 Gm5643-201ENSMUST00000117081 966 ntBASIC13.17□□□□□ -0.3
Nup35Q8R4R6 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nup35Q8R4R6 Gm37856-201ENSMUST00000191634 999 ntBASIC13.17□□□□□ -0.3
Nup35Q8R4R6 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nup35Q8R4R6 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nup35Q8R4R6 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Nup35Q8R4R6 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nup35Q8R4R6 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nup35Q8R4R6 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nup35Q8R4R6 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Nup35Q8R4R6 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nup35Q8R4R6 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Nup35Q8R4R6 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nup35Q8R4R6 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nup35Q8R4R6 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nup35Q8R4R6 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Nup35Q8R4R6 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nup35Q8R4R6 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nup35Q8R4R6 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Nup35Q8R4R6 Phf7-203ENSMUST00000226565 1971 ntBASIC13.16□□□□□ -0.3
Nup35Q8R4R6 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Nup35Q8R4R6 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nup35Q8R4R6 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nup35Q8R4R6 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nup35Q8R4R6 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nup35Q8R4R6 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nup35Q8R4R6 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC13.16□□□□□ -0.3
Nup35Q8R4R6 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nup35Q8R4R6 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nup35Q8R4R6 Gm13181-201ENSMUST00000120117 1069 ntBASIC13.16□□□□□ -0.3
Nup35Q8R4R6 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Nup35Q8R4R6 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nup35Q8R4R6 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nup35Q8R4R6 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nup35Q8R4R6 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nup35Q8R4R6 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms