Protein–RNA interactions for Protein: Q8R3P9

Slf1, SMC5-SMC6 complex localization factor protein 1, mousemouse

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slf1Q8R3P9 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Slf1Q8R3P9 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Slf1Q8R3P9 Gm29340-201ENSMUST00000188763 3854 ntBASIC16.35■□□□□ 0.21
Slf1Q8R3P9 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Slf1Q8R3P9 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Slf1Q8R3P9 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Slf1Q8R3P9 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Slf1Q8R3P9 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC16.34■□□□□ 0.21
Slf1Q8R3P9 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Slf1Q8R3P9 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Slf1Q8R3P9 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC16.34■□□□□ 0.21
Slf1Q8R3P9 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Slf1Q8R3P9 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Slf1Q8R3P9 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC16.34■□□□□ 0.21
Slf1Q8R3P9 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Slf1Q8R3P9 Gm10517-202ENSMUST00000192970 758 ntBASIC16.34■□□□□ 0.21
Slf1Q8R3P9 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Slf1Q8R3P9 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Slf1Q8R3P9 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Slf1Q8R3P9 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Slf1Q8R3P9 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Slf1Q8R3P9 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Slf1Q8R3P9 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC16.34■□□□□ 0.21
Slf1Q8R3P9 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Slf1Q8R3P9 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Slf1Q8R3P9 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Slf1Q8R3P9 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
Slf1Q8R3P9 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Slf1Q8R3P9 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Slf1Q8R3P9 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Slf1Q8R3P9 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Slf1Q8R3P9 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Slf1Q8R3P9 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Slf1Q8R3P9 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Slf1Q8R3P9 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Slf1Q8R3P9 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC16.33■□□□□ 0.2
Slf1Q8R3P9 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC16.33■□□□□ 0.2
Slf1Q8R3P9 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC16.33■□□□□ 0.2
Slf1Q8R3P9 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Slf1Q8R3P9 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Slf1Q8R3P9 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
Slf1Q8R3P9 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Slf1Q8R3P9 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Slf1Q8R3P9 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Slf1Q8R3P9 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
Slf1Q8R3P9 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Slf1Q8R3P9 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Slf1Q8R3P9 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Slf1Q8R3P9 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Slf1Q8R3P9 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Slf1Q8R3P9 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Slf1Q8R3P9 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Slf1Q8R3P9 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Slf1Q8R3P9 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Slf1Q8R3P9 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Slf1Q8R3P9 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Slf1Q8R3P9 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Slf1Q8R3P9 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Slf1Q8R3P9 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Slf1Q8R3P9 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Slf1Q8R3P9 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Slf1Q8R3P9 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Slf1Q8R3P9 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Slf1Q8R3P9 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Slf1Q8R3P9 AC124581.1-201ENSMUST00000225416 1399 ntBASIC16.32■□□□□ 0.2
Slf1Q8R3P9 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Slf1Q8R3P9 AC174678.1-201ENSMUST00000228007 2749 ntBASIC16.32■□□□□ 0.2
Slf1Q8R3P9 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Slf1Q8R3P9 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Slf1Q8R3P9 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Slf1Q8R3P9 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Slf1Q8R3P9 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Slf1Q8R3P9 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Slf1Q8R3P9 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Slf1Q8R3P9 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Slf1Q8R3P9 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Slf1Q8R3P9 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC16.31■□□□□ 0.2
Slf1Q8R3P9 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Slf1Q8R3P9 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Slf1Q8R3P9 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Slf1Q8R3P9 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Slf1Q8R3P9 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Slf1Q8R3P9 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Slf1Q8R3P9 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
Slf1Q8R3P9 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Slf1Q8R3P9 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Slf1Q8R3P9 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Slf1Q8R3P9 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC16.31■□□□□ 0.2
Slf1Q8R3P9 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Slf1Q8R3P9 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Slf1Q8R3P9 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Slf1Q8R3P9 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Slf1Q8R3P9 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Slf1Q8R3P9 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Slf1Q8R3P9 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Slf1Q8R3P9 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Slf1Q8R3P9 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Slf1Q8R3P9 CT010444.2-201ENSMUST00000217877 1629 ntBASIC16.3■□□□□ 0.2
Slf1Q8R3P9 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Slf1Q8R3P9 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms