Protein–RNA interactions for Protein: Q8R317

Ubqln1, Ubiquilin-1, mousemouse

Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubqln1Q8R317 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ubqln1Q8R317 Gm7729-201ENSMUST00000050143 801 ntBASIC15.3■□□□□ 0.04
Ubqln1Q8R317 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ubqln1Q8R317 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ubqln1Q8R317 Ptprs-211ENSMUST00000223859 5588 ntBASIC15.3■□□□□ 0.04
Ubqln1Q8R317 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ubqln1Q8R317 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ubqln1Q8R317 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ubqln1Q8R317 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ubqln1Q8R317 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ubqln1Q8R317 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ubqln1Q8R317 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ubqln1Q8R317 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ubqln1Q8R317 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ubqln1Q8R317 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ubqln1Q8R317 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ubqln1Q8R317 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ubqln1Q8R317 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC15.29■□□□□ 0.04
Ubqln1Q8R317 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ubqln1Q8R317 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Ubqln1Q8R317 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ubqln1Q8R317 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ubqln1Q8R317 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Ubqln1Q8R317 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC15.29■□□□□ 0.04
Ubqln1Q8R317 Gm11950-201ENSMUST00000121615 838 ntBASIC15.29■□□□□ 0.04
Ubqln1Q8R317 Gm44430-201ENSMUST00000203376 995 ntBASIC15.29■□□□□ 0.04
Ubqln1Q8R317 Gm45328-201ENSMUST00000210942 917 ntBASIC15.29■□□□□ 0.04
Ubqln1Q8R317 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ubqln1Q8R317 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ubqln1Q8R317 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC15.29■□□□□ 0.04
Ubqln1Q8R317 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ubqln1Q8R317 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ubqln1Q8R317 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Ubqln1Q8R317 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Ubqln1Q8R317 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ubqln1Q8R317 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Ubqln1Q8R317 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ubqln1Q8R317 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Ubqln1Q8R317 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ubqln1Q8R317 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ubqln1Q8R317 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ubqln1Q8R317 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ubqln1Q8R317 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ubqln1Q8R317 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ubqln1Q8R317 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ubqln1Q8R317 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Ubqln1Q8R317 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC15.28■□□□□ 0.04
Ubqln1Q8R317 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ubqln1Q8R317 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ubqln1Q8R317 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ubqln1Q8R317 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
Ubqln1Q8R317 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ubqln1Q8R317 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ubqln1Q8R317 Gm6345-202ENSMUST00000180900 204 ntBASIC15.28■□□□□ 0.04
Ubqln1Q8R317 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ubqln1Q8R317 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ubqln1Q8R317 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ubqln1Q8R317 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Ubqln1Q8R317 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ubqln1Q8R317 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ubqln1Q8R317 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Ubqln1Q8R317 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ubqln1Q8R317 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ubqln1Q8R317 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC15.28■□□□□ 0.04
Ubqln1Q8R317 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ubqln1Q8R317 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC15.28■□□□□ 0.04
Ubqln1Q8R317 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ubqln1Q8R317 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Ubqln1Q8R317 Zkscan4-202ENSMUST00000225845 1506 ntBASIC15.27■□□□□ 0.04
Ubqln1Q8R317 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ubqln1Q8R317 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ubqln1Q8R317 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ubqln1Q8R317 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ubqln1Q8R317 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Ubqln1Q8R317 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Ubqln1Q8R317 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ubqln1Q8R317 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ubqln1Q8R317 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Ubqln1Q8R317 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Ubqln1Q8R317 Gm14464-201ENSMUST00000119658 1254 ntBASIC15.27■□□□□ 0.04
Ubqln1Q8R317 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC15.27■□□□□ 0.04
Ubqln1Q8R317 Gm29518-201ENSMUST00000190858 372 ntBASIC15.27■□□□□ 0.04
Ubqln1Q8R317 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ubqln1Q8R317 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ubqln1Q8R317 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ubqln1Q8R317 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ubqln1Q8R317 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Ubqln1Q8R317 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Ubqln1Q8R317 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Ubqln1Q8R317 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
Ubqln1Q8R317 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC15.27■□□□□ 0.03
Ubqln1Q8R317 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ubqln1Q8R317 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
Ubqln1Q8R317 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC15.27■□□□□ 0.03
Ubqln1Q8R317 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ubqln1Q8R317 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ubqln1Q8R317 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ubqln1Q8R317 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ubqln1Q8R317 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ubqln1Q8R317 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms