Protein–RNA interactions for Protein: Q8R2T8

Gtf3c5, General transcription factor 3C polypeptide 5, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf3c5Q8R2T8 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Gtf3c5Q8R2T8 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
Gtf3c5Q8R2T8 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Gtf3c5Q8R2T8 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC18.94■□□□□ 0.62
Gtf3c5Q8R2T8 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Gtf3c5Q8R2T8 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Gtf3c5Q8R2T8 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Gtf3c5Q8R2T8 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Gtf3c5Q8R2T8 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Gtf3c5Q8R2T8 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Gtf3c5Q8R2T8 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Gtf3c5Q8R2T8 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Gtf3c5Q8R2T8 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Gtf3c5Q8R2T8 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Gtf3c5Q8R2T8 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Gtf3c5Q8R2T8 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Gtf3c5Q8R2T8 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Gtf3c5Q8R2T8 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Gtf3c5Q8R2T8 Gm27357-201ENSMUST00000183754 135 ntBASIC18.93■□□□□ 0.62
Gtf3c5Q8R2T8 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Gtf3c5Q8R2T8 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Gtf3c5Q8R2T8 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Gtf3c5Q8R2T8 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
Gtf3c5Q8R2T8 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Gtf3c5Q8R2T8 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
Gtf3c5Q8R2T8 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Gtf3c5Q8R2T8 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Gtf3c5Q8R2T8 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Gtf3c5Q8R2T8 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Gtf3c5Q8R2T8 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Gtf3c5Q8R2T8 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Gtf3c5Q8R2T8 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Gtf3c5Q8R2T8 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Gtf3c5Q8R2T8 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Gtf3c5Q8R2T8 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Gtf3c5Q8R2T8 Gm42829-201ENSMUST00000198417 2585 ntBASIC18.92■□□□□ 0.62
Gtf3c5Q8R2T8 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Gtf3c5Q8R2T8 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Gtf3c5Q8R2T8 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Gtf3c5Q8R2T8 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Gtf3c5Q8R2T8 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Gtf3c5Q8R2T8 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Gtf3c5Q8R2T8 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Gtf3c5Q8R2T8 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Gtf3c5Q8R2T8 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Gtf3c5Q8R2T8 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC18.91■□□□□ 0.62
Gtf3c5Q8R2T8 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC18.91■□□□□ 0.62
Gtf3c5Q8R2T8 AC154471.1-201ENSMUST00000224418 436 ntBASIC18.91■□□□□ 0.62
Gtf3c5Q8R2T8 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Gtf3c5Q8R2T8 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Gtf3c5Q8R2T8 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Gtf3c5Q8R2T8 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Gtf3c5Q8R2T8 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Gtf3c5Q8R2T8 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Gtf3c5Q8R2T8 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Gtf3c5Q8R2T8 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Gtf3c5Q8R2T8 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Gtf3c5Q8R2T8 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Gtf3c5Q8R2T8 Gm4780-202ENSMUST00000215200 2644 ntBASIC18.9■□□□□ 0.62
Gtf3c5Q8R2T8 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Gtf3c5Q8R2T8 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC18.9■□□□□ 0.62
Gtf3c5Q8R2T8 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Gtf3c5Q8R2T8 Gm15794-201ENSMUST00000120182 631 ntBASIC18.9■□□□□ 0.62
Gtf3c5Q8R2T8 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Gtf3c5Q8R2T8 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Gtf3c5Q8R2T8 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC18.9■□□□□ 0.62
Gtf3c5Q8R2T8 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Gtf3c5Q8R2T8 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Gtf3c5Q8R2T8 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC18.9■□□□□ 0.62
Gtf3c5Q8R2T8 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Gtf3c5Q8R2T8 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Gtf3c5Q8R2T8 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Gtf3c5Q8R2T8 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Gtf3c5Q8R2T8 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC18.9■□□□□ 0.62
Gtf3c5Q8R2T8 Gm15442-201ENSMUST00000117905 1527 ntBASIC18.9■□□□□ 0.62
Gtf3c5Q8R2T8 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.62
Gtf3c5Q8R2T8 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.62
Gtf3c5Q8R2T8 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Gtf3c5Q8R2T8 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Gtf3c5Q8R2T8 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Gtf3c5Q8R2T8 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Gtf3c5Q8R2T8 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Gtf3c5Q8R2T8 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Gtf3c5Q8R2T8 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Gtf3c5Q8R2T8 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Gtf3c5Q8R2T8 Gm13312-201ENSMUST00000119631 718 ntBASIC18.89■□□□□ 0.61
Gtf3c5Q8R2T8 Gm7284-201ENSMUST00000131667 944 ntBASIC18.89■□□□□ 0.61
Gtf3c5Q8R2T8 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Gtf3c5Q8R2T8 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Gtf3c5Q8R2T8 Rprl3-201ENSMUST00000157400 290 ntBASIC18.89■□□□□ 0.61
Gtf3c5Q8R2T8 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC18.89■□□□□ 0.61
Gtf3c5Q8R2T8 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
Gtf3c5Q8R2T8 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Gtf3c5Q8R2T8 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Gtf3c5Q8R2T8 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Gtf3c5Q8R2T8 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Gtf3c5Q8R2T8 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Gtf3c5Q8R2T8 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Gtf3c5Q8R2T8 Zkscan4-202ENSMUST00000225845 1506 ntBASIC18.89■□□□□ 0.61
Gtf3c5Q8R2T8 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms