Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Chmp7Q8R1T1 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Chmp7Q8R1T1 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Chmp7Q8R1T1 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Chmp7Q8R1T1 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Chmp7Q8R1T1 Gm36858-201ENSMUST00000194501 2391 ntBASIC20.59■□□□□ 0.89
Chmp7Q8R1T1 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Chmp7Q8R1T1 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Chmp7Q8R1T1 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Chmp7Q8R1T1 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Chmp7Q8R1T1 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Chmp7Q8R1T1 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC20.59■□□□□ 0.89
Chmp7Q8R1T1 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Chmp7Q8R1T1 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Chmp7Q8R1T1 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Chmp7Q8R1T1 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Chmp7Q8R1T1 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Chmp7Q8R1T1 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC20.59■□□□□ 0.89
Chmp7Q8R1T1 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Chmp7Q8R1T1 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC20.59■□□□□ 0.89
Chmp7Q8R1T1 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Chmp7Q8R1T1 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Chmp7Q8R1T1 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Chmp7Q8R1T1 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
Chmp7Q8R1T1 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Chmp7Q8R1T1 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Chmp7Q8R1T1 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Chmp7Q8R1T1 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Chmp7Q8R1T1 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Chmp7Q8R1T1 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Chmp7Q8R1T1 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC20.58■□□□□ 0.89
Chmp7Q8R1T1 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Chmp7Q8R1T1 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC20.58■□□□□ 0.89
Chmp7Q8R1T1 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Chmp7Q8R1T1 AC090659.1-201ENSMUST00000224334 768 ntBASIC20.58■□□□□ 0.89
Chmp7Q8R1T1 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Chmp7Q8R1T1 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Chmp7Q8R1T1 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Chmp7Q8R1T1 Gm43338-201ENSMUST00000198617 2223 ntBASIC20.58■□□□□ 0.88
Chmp7Q8R1T1 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Chmp7Q8R1T1 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Chmp7Q8R1T1 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Chmp7Q8R1T1 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Chmp7Q8R1T1 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Chmp7Q8R1T1 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
Chmp7Q8R1T1 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Chmp7Q8R1T1 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Chmp7Q8R1T1 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC20.57■□□□□ 0.88
Chmp7Q8R1T1 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Chmp7Q8R1T1 Gm2756-201ENSMUST00000195851 400 ntBASIC20.57■□□□□ 0.88
Chmp7Q8R1T1 Gm45683-201ENSMUST00000210825 1247 ntBASIC20.57■□□□□ 0.88
Chmp7Q8R1T1 AC117588.1-201ENSMUST00000228510 999 ntBASIC20.57■□□□□ 0.88
Chmp7Q8R1T1 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Chmp7Q8R1T1 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Chmp7Q8R1T1 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Chmp7Q8R1T1 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Chmp7Q8R1T1 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Chmp7Q8R1T1 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Chmp7Q8R1T1 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Chmp7Q8R1T1 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Chmp7Q8R1T1 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Chmp7Q8R1T1 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC20.56■□□□□ 0.88
Chmp7Q8R1T1 Gm8784-201ENSMUST00000222096 1435 ntBASIC20.56■□□□□ 0.88
Chmp7Q8R1T1 Gm45606-201ENSMUST00000209836 2795 ntBASIC20.56■□□□□ 0.88
Chmp7Q8R1T1 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Chmp7Q8R1T1 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC20.56■□□□□ 0.88
Chmp7Q8R1T1 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
Chmp7Q8R1T1 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC20.56■□□□□ 0.88
Chmp7Q8R1T1 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC20.56■□□□□ 0.88
Chmp7Q8R1T1 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC20.56■□□□□ 0.88
Chmp7Q8R1T1 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Chmp7Q8R1T1 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Chmp7Q8R1T1 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Chmp7Q8R1T1 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Chmp7Q8R1T1 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Chmp7Q8R1T1 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Chmp7Q8R1T1 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Chmp7Q8R1T1 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Chmp7Q8R1T1 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Chmp7Q8R1T1 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Chmp7Q8R1T1 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
Chmp7Q8R1T1 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC20.55■□□□□ 0.88
Chmp7Q8R1T1 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Chmp7Q8R1T1 Gm43575-201ENSMUST00000196420 516 ntBASIC20.55■□□□□ 0.88
Chmp7Q8R1T1 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC20.55■□□□□ 0.88
Chmp7Q8R1T1 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Chmp7Q8R1T1 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Chmp7Q8R1T1 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Chmp7Q8R1T1 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Chmp7Q8R1T1 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Chmp7Q8R1T1 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Chmp7Q8R1T1 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Chmp7Q8R1T1 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Chmp7Q8R1T1 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Chmp7Q8R1T1 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC20.54■□□□□ 0.88
Chmp7Q8R1T1 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC20.54■□□□□ 0.88
Chmp7Q8R1T1 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Chmp7Q8R1T1 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC20.54■□□□□ 0.88
Chmp7Q8R1T1 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Chmp7Q8R1T1 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC20.54■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms