Protein–RNA interactions for Protein: Q8R1N4

Nudcd3, NudC domain-containing protein 3, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd3Q8R1N4 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Nudcd3Q8R1N4 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nudcd3Q8R1N4 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nudcd3Q8R1N4 Gm12527-201ENSMUST00000117967 564 ntBASIC16.15■□□□□ 0.18
Nudcd3Q8R1N4 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC16.15■□□□□ 0.18
Nudcd3Q8R1N4 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Nudcd3Q8R1N4 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nudcd3Q8R1N4 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nudcd3Q8R1N4 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Nudcd3Q8R1N4 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nudcd3Q8R1N4 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nudcd3Q8R1N4 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nudcd3Q8R1N4 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nudcd3Q8R1N4 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nudcd3Q8R1N4 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nudcd3Q8R1N4 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nudcd3Q8R1N4 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nudcd3Q8R1N4 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nudcd3Q8R1N4 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nudcd3Q8R1N4 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Nudcd3Q8R1N4 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nudcd3Q8R1N4 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Nudcd3Q8R1N4 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Nudcd3Q8R1N4 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nudcd3Q8R1N4 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nudcd3Q8R1N4 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Nudcd3Q8R1N4 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.18
Nudcd3Q8R1N4 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC16.14■□□□□ 0.18
Nudcd3Q8R1N4 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
Nudcd3Q8R1N4 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
Nudcd3Q8R1N4 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Nudcd3Q8R1N4 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nudcd3Q8R1N4 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nudcd3Q8R1N4 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nudcd3Q8R1N4 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nudcd3Q8R1N4 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nudcd3Q8R1N4 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nudcd3Q8R1N4 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Nudcd3Q8R1N4 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nudcd3Q8R1N4 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nudcd3Q8R1N4 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Nudcd3Q8R1N4 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nudcd3Q8R1N4 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Nudcd3Q8R1N4 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC16.14■□□□□ 0.17
Nudcd3Q8R1N4 AC135637.1-201ENSMUST00000227750 365 ntBASIC16.14■□□□□ 0.17
Nudcd3Q8R1N4 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nudcd3Q8R1N4 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nudcd3Q8R1N4 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nudcd3Q8R1N4 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nudcd3Q8R1N4 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nudcd3Q8R1N4 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Nudcd3Q8R1N4 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC16.14■□□□□ 0.17
Nudcd3Q8R1N4 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nudcd3Q8R1N4 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC16.14■□□□□ 0.17
Nudcd3Q8R1N4 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nudcd3Q8R1N4 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nudcd3Q8R1N4 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nudcd3Q8R1N4 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Nudcd3Q8R1N4 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Nudcd3Q8R1N4 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nudcd3Q8R1N4 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
Nudcd3Q8R1N4 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nudcd3Q8R1N4 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nudcd3Q8R1N4 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
Nudcd3Q8R1N4 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Nudcd3Q8R1N4 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nudcd3Q8R1N4 App-207ENSMUST00000227737 2827 ntBASIC16.13■□□□□ 0.17
Nudcd3Q8R1N4 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nudcd3Q8R1N4 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC16.13■□□□□ 0.17
Nudcd3Q8R1N4 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Nudcd3Q8R1N4 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nudcd3Q8R1N4 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC16.13■□□□□ 0.17
Nudcd3Q8R1N4 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nudcd3Q8R1N4 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nudcd3Q8R1N4 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC16.13■□□□□ 0.17
Nudcd3Q8R1N4 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nudcd3Q8R1N4 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC16.13■□□□□ 0.17
Nudcd3Q8R1N4 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Nudcd3Q8R1N4 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nudcd3Q8R1N4 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Nudcd3Q8R1N4 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Nudcd3Q8R1N4 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nudcd3Q8R1N4 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nudcd3Q8R1N4 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nudcd3Q8R1N4 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC16.12■□□□□ 0.17
Nudcd3Q8R1N4 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nudcd3Q8R1N4 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Nudcd3Q8R1N4 Gm13186-201ENSMUST00000118031 316 ntBASIC16.12■□□□□ 0.17
Nudcd3Q8R1N4 Gm13181-201ENSMUST00000120117 1069 ntBASIC16.12■□□□□ 0.17
Nudcd3Q8R1N4 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Nudcd3Q8R1N4 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC16.12■□□□□ 0.17
Nudcd3Q8R1N4 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC16.12■□□□□ 0.17
Nudcd3Q8R1N4 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nudcd3Q8R1N4 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nudcd3Q8R1N4 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nudcd3Q8R1N4 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nudcd3Q8R1N4 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nudcd3Q8R1N4 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nudcd3Q8R1N4 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Nudcd3Q8R1N4 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms