Protein–RNA interactions for Protein: Q8R1F9

Rpp40, Ribonuclease P protein subunit p40, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp40Q8R1F9 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC17.26■□□□□ 0.35
Rpp40Q8R1F9 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rpp40Q8R1F9 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rpp40Q8R1F9 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC17.26■□□□□ 0.35
Rpp40Q8R1F9 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC17.25■□□□□ 0.35
Rpp40Q8R1F9 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rpp40Q8R1F9 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Rpp40Q8R1F9 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rpp40Q8R1F9 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rpp40Q8R1F9 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rpp40Q8R1F9 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC17.25■□□□□ 0.35
Rpp40Q8R1F9 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Rpp40Q8R1F9 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rpp40Q8R1F9 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC17.25■□□□□ 0.35
Rpp40Q8R1F9 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC17.25■□□□□ 0.35
Rpp40Q8R1F9 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rpp40Q8R1F9 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Rpp40Q8R1F9 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Rpp40Q8R1F9 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Rpp40Q8R1F9 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC17.25■□□□□ 0.35
Rpp40Q8R1F9 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC17.25■□□□□ 0.35
Rpp40Q8R1F9 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rpp40Q8R1F9 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rpp40Q8R1F9 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Rpp40Q8R1F9 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rpp40Q8R1F9 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rpp40Q8R1F9 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rpp40Q8R1F9 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Rpp40Q8R1F9 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rpp40Q8R1F9 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rpp40Q8R1F9 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Rpp40Q8R1F9 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Rpp40Q8R1F9 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rpp40Q8R1F9 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rpp40Q8R1F9 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rpp40Q8R1F9 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rpp40Q8R1F9 Gm26917-202ENSMUST00000192833 3329 ntBASIC17.24■□□□□ 0.35
Rpp40Q8R1F9 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC17.24■□□□□ 0.35
Rpp40Q8R1F9 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC17.24■□□□□ 0.35
Rpp40Q8R1F9 Vti1a-206ENSMUST00000225529 1244 ntBASIC17.24■□□□□ 0.35
Rpp40Q8R1F9 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rpp40Q8R1F9 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rpp40Q8R1F9 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Rpp40Q8R1F9 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Rpp40Q8R1F9 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rpp40Q8R1F9 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Rpp40Q8R1F9 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rpp40Q8R1F9 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Rpp40Q8R1F9 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Rpp40Q8R1F9 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rpp40Q8R1F9 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Rpp40Q8R1F9 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rpp40Q8R1F9 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Rpp40Q8R1F9 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rpp40Q8R1F9 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rpp40Q8R1F9 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rpp40Q8R1F9 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC17.23■□□□□ 0.35
Rpp40Q8R1F9 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rpp40Q8R1F9 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Rpp40Q8R1F9 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC17.23■□□□□ 0.35
Rpp40Q8R1F9 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rpp40Q8R1F9 AC159301.1-201ENSMUST00000225130 1182 ntBASIC17.23■□□□□ 0.35
Rpp40Q8R1F9 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rpp40Q8R1F9 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Rpp40Q8R1F9 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Rpp40Q8R1F9 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rpp40Q8R1F9 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rpp40Q8R1F9 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rpp40Q8R1F9 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rpp40Q8R1F9 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC17.23■□□□□ 0.35
Rpp40Q8R1F9 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rpp40Q8R1F9 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rpp40Q8R1F9 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC17.22■□□□□ 0.35
Rpp40Q8R1F9 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Rpp40Q8R1F9 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rpp40Q8R1F9 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rpp40Q8R1F9 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rpp40Q8R1F9 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC17.22■□□□□ 0.35
Rpp40Q8R1F9 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC17.22■□□□□ 0.35
Rpp40Q8R1F9 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rpp40Q8R1F9 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rpp40Q8R1F9 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rpp40Q8R1F9 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rpp40Q8R1F9 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rpp40Q8R1F9 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rpp40Q8R1F9 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rpp40Q8R1F9 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rpp40Q8R1F9 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rpp40Q8R1F9 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rpp40Q8R1F9 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rpp40Q8R1F9 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rpp40Q8R1F9 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rpp40Q8R1F9 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rpp40Q8R1F9 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC17.21■□□□□ 0.35
Rpp40Q8R1F9 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rpp40Q8R1F9 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
Rpp40Q8R1F9 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Rpp40Q8R1F9 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC17.21■□□□□ 0.35
Rpp40Q8R1F9 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Rpp40Q8R1F9 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms