Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sf3a1Q8K4Z5 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Sf3a1Q8K4Z5 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
Sf3a1Q8K4Z5 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sf3a1Q8K4Z5 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sf3a1Q8K4Z5 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC19.73■□□□□ 0.75
Sf3a1Q8K4Z5 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sf3a1Q8K4Z5 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sf3a1Q8K4Z5 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sf3a1Q8K4Z5 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sf3a1Q8K4Z5 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sf3a1Q8K4Z5 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sf3a1Q8K4Z5 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sf3a1Q8K4Z5 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sf3a1Q8K4Z5 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Sf3a1Q8K4Z5 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sf3a1Q8K4Z5 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Sf3a1Q8K4Z5 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sf3a1Q8K4Z5 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Sf3a1Q8K4Z5 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC19.73■□□□□ 0.75
Sf3a1Q8K4Z5 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sf3a1Q8K4Z5 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sf3a1Q8K4Z5 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Sf3a1Q8K4Z5 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sf3a1Q8K4Z5 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sf3a1Q8K4Z5 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sf3a1Q8K4Z5 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Sf3a1Q8K4Z5 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sf3a1Q8K4Z5 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sf3a1Q8K4Z5 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sf3a1Q8K4Z5 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC19.73■□□□□ 0.75
Sf3a1Q8K4Z5 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Sf3a1Q8K4Z5 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Sf3a1Q8K4Z5 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC19.72■□□□□ 0.75
Sf3a1Q8K4Z5 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Sf3a1Q8K4Z5 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC19.72■□□□□ 0.75
Sf3a1Q8K4Z5 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Sf3a1Q8K4Z5 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Sf3a1Q8K4Z5 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Sf3a1Q8K4Z5 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Sf3a1Q8K4Z5 AC114585.2-202ENSMUST00000228094 426 ntBASIC19.72■□□□□ 0.75
Sf3a1Q8K4Z5 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Sf3a1Q8K4Z5 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Sf3a1Q8K4Z5 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Sf3a1Q8K4Z5 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Sf3a1Q8K4Z5 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Sf3a1Q8K4Z5 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Sf3a1Q8K4Z5 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Sf3a1Q8K4Z5 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Sf3a1Q8K4Z5 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Sf3a1Q8K4Z5 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Sf3a1Q8K4Z5 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Sf3a1Q8K4Z5 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC19.72■□□□□ 0.75
Sf3a1Q8K4Z5 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC19.71■□□□□ 0.75
Sf3a1Q8K4Z5 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sf3a1Q8K4Z5 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC19.71■□□□□ 0.75
Sf3a1Q8K4Z5 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC19.71■□□□□ 0.75
Sf3a1Q8K4Z5 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sf3a1Q8K4Z5 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Sf3a1Q8K4Z5 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Sf3a1Q8K4Z5 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC19.71■□□□□ 0.75
Sf3a1Q8K4Z5 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Sf3a1Q8K4Z5 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC19.71■□□□□ 0.75
Sf3a1Q8K4Z5 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sf3a1Q8K4Z5 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sf3a1Q8K4Z5 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sf3a1Q8K4Z5 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sf3a1Q8K4Z5 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sf3a1Q8K4Z5 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Sf3a1Q8K4Z5 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sf3a1Q8K4Z5 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Sf3a1Q8K4Z5 AC132265.1-201ENSMUST00000219233 1665 ntBASIC19.71■□□□□ 0.75
Sf3a1Q8K4Z5 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sf3a1Q8K4Z5 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sf3a1Q8K4Z5 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sf3a1Q8K4Z5 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Sf3a1Q8K4Z5 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Sf3a1Q8K4Z5 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sf3a1Q8K4Z5 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Sf3a1Q8K4Z5 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Sf3a1Q8K4Z5 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sf3a1Q8K4Z5 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC19.7■□□□□ 0.74
Sf3a1Q8K4Z5 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sf3a1Q8K4Z5 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC19.7■□□□□ 0.74
Sf3a1Q8K4Z5 Gm10819-201ENSMUST00000099988 561 ntBASIC19.7■□□□□ 0.74
Sf3a1Q8K4Z5 Gm6858-201ENSMUST00000208582 1468 ntBASIC19.7■□□□□ 0.74
Sf3a1Q8K4Z5 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC19.7■□□□□ 0.74
Sf3a1Q8K4Z5 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sf3a1Q8K4Z5 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Sf3a1Q8K4Z5 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC19.7■□□□□ 0.74
Sf3a1Q8K4Z5 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC19.7■□□□□ 0.74
Sf3a1Q8K4Z5 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sf3a1Q8K4Z5 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Sf3a1Q8K4Z5 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Sf3a1Q8K4Z5 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sf3a1Q8K4Z5 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sf3a1Q8K4Z5 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sf3a1Q8K4Z5 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sf3a1Q8K4Z5 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC19.69■□□□□ 0.74
Sf3a1Q8K4Z5 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC19.69■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms