Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ddx54Q8K4L0 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC21.05■□□□□ 0.96
Ddx54Q8K4L0 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ddx54Q8K4L0 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC21.05■□□□□ 0.96
Ddx54Q8K4L0 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Ddx54Q8K4L0 Rprl2-201ENSMUST00000157150 290 ntBASIC21.05■□□□□ 0.96
Ddx54Q8K4L0 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC21.05■□□□□ 0.96
Ddx54Q8K4L0 AC151836.1-202ENSMUST00000226259 753 ntBASIC21.05■□□□□ 0.96
Ddx54Q8K4L0 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ddx54Q8K4L0 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ddx54Q8K4L0 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ddx54Q8K4L0 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ddx54Q8K4L0 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ddx54Q8K4L0 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ddx54Q8K4L0 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ddx54Q8K4L0 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Ddx54Q8K4L0 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ddx54Q8K4L0 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Ddx54Q8K4L0 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ddx54Q8K4L0 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ddx54Q8K4L0 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Ddx54Q8K4L0 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Ddx54Q8K4L0 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Ddx54Q8K4L0 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ddx54Q8K4L0 Gm8344-201ENSMUST00000119813 856 ntBASIC21.04■□□□□ 0.96
Ddx54Q8K4L0 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Ddx54Q8K4L0 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC21.04■□□□□ 0.96
Ddx54Q8K4L0 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC21.04■□□□□ 0.96
Ddx54Q8K4L0 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Ddx54Q8K4L0 AC125206.2-201ENSMUST00000217454 574 ntBASIC21.04■□□□□ 0.96
Ddx54Q8K4L0 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ddx54Q8K4L0 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ddx54Q8K4L0 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ddx54Q8K4L0 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ddx54Q8K4L0 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ddx54Q8K4L0 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ddx54Q8K4L0 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ddx54Q8K4L0 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ddx54Q8K4L0 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ddx54Q8K4L0 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
Ddx54Q8K4L0 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Ddx54Q8K4L0 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ddx54Q8K4L0 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ddx54Q8K4L0 Gm15358-201ENSMUST00000119249 520 ntBASIC21.03■□□□□ 0.96
Ddx54Q8K4L0 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC21.03■□□□□ 0.96
Ddx54Q8K4L0 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC21.03■□□□□ 0.96
Ddx54Q8K4L0 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Ddx54Q8K4L0 Gm27437-201ENSMUST00000183429 107 ntBASIC21.03■□□□□ 0.96
Ddx54Q8K4L0 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC21.03■□□□□ 0.96
Ddx54Q8K4L0 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Ddx54Q8K4L0 Gm5628-201ENSMUST00000222318 1049 ntBASIC21.03■□□□□ 0.96
Ddx54Q8K4L0 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ddx54Q8K4L0 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Ddx54Q8K4L0 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Ddx54Q8K4L0 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ddx54Q8K4L0 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Ddx54Q8K4L0 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Ddx54Q8K4L0 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ddx54Q8K4L0 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ddx54Q8K4L0 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ddx54Q8K4L0 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ddx54Q8K4L0 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Ddx54Q8K4L0 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ddx54Q8K4L0 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
Ddx54Q8K4L0 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Ddx54Q8K4L0 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ddx54Q8K4L0 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ddx54Q8K4L0 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Ddx54Q8K4L0 Gm5866-201ENSMUST00000177881 973 ntBASIC21.02■□□□□ 0.96
Ddx54Q8K4L0 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Ddx54Q8K4L0 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC21.02■□□□□ 0.96
Ddx54Q8K4L0 AC126408.1-201ENSMUST00000225184 523 ntBASIC21.02■□□□□ 0.96
Ddx54Q8K4L0 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Ddx54Q8K4L0 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ddx54Q8K4L0 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ddx54Q8K4L0 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ddx54Q8K4L0 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ddx54Q8K4L0 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ddx54Q8K4L0 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ddx54Q8K4L0 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ddx54Q8K4L0 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ddx54Q8K4L0 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.95
Ddx54Q8K4L0 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC21.02■□□□□ 0.95
Ddx54Q8K4L0 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Ddx54Q8K4L0 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Ddx54Q8K4L0 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ddx54Q8K4L0 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Ddx54Q8K4L0 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ddx54Q8K4L0 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ddx54Q8K4L0 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
Ddx54Q8K4L0 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC21.01■□□□□ 0.95
Ddx54Q8K4L0 Gm14127-201ENSMUST00000117906 678 ntBASIC21.01■□□□□ 0.95
Ddx54Q8K4L0 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC21.01■□□□□ 0.95
Ddx54Q8K4L0 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC21.01■□□□□ 0.95
Ddx54Q8K4L0 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Ddx54Q8K4L0 Gm20553-201ENSMUST00000204205 844 ntBASIC21.01■□□□□ 0.95
Ddx54Q8K4L0 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Ddx54Q8K4L0 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ddx54Q8K4L0 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ddx54Q8K4L0 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms