Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ebf4Q8K4J2 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ebf4Q8K4J2 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ebf4Q8K4J2 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ebf4Q8K4J2 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ebf4Q8K4J2 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ebf4Q8K4J2 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Ebf4Q8K4J2 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ebf4Q8K4J2 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ebf4Q8K4J2 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ebf4Q8K4J2 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ebf4Q8K4J2 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Ebf4Q8K4J2 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
Ebf4Q8K4J2 Gm29257-201ENSMUST00000186115 639 ntBASIC14.76□□□□□ -0.05
Ebf4Q8K4J2 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ebf4Q8K4J2 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Ebf4Q8K4J2 Tfap2a-203ENSMUST00000223869 2037 ntBASIC14.76□□□□□ -0.05
Ebf4Q8K4J2 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ebf4Q8K4J2 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Ebf4Q8K4J2 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC14.76□□□□□ -0.05
Ebf4Q8K4J2 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Ebf4Q8K4J2 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Ebf4Q8K4J2 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ebf4Q8K4J2 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ebf4Q8K4J2 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Ebf4Q8K4J2 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ebf4Q8K4J2 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Ebf4Q8K4J2 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC14.75□□□□□ -0.05
Ebf4Q8K4J2 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ebf4Q8K4J2 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ebf4Q8K4J2 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ebf4Q8K4J2 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ebf4Q8K4J2 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ebf4Q8K4J2 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Ebf4Q8K4J2 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC14.75□□□□□ -0.05
Ebf4Q8K4J2 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC14.75□□□□□ -0.05
Ebf4Q8K4J2 Gm37025-201ENSMUST00000195159 829 ntBASIC14.75□□□□□ -0.05
Ebf4Q8K4J2 Gm42569-201ENSMUST00000200539 472 ntBASIC14.75□□□□□ -0.05
Ebf4Q8K4J2 AC163280.1-201ENSMUST00000228194 1100 ntBASIC14.75□□□□□ -0.05
Ebf4Q8K4J2 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ebf4Q8K4J2 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ebf4Q8K4J2 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ebf4Q8K4J2 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ebf4Q8K4J2 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ebf4Q8K4J2 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ebf4Q8K4J2 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC14.75□□□□□ -0.05
Ebf4Q8K4J2 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ebf4Q8K4J2 Gfra2-202ENSMUST00000227633 1480 ntBASIC14.75□□□□□ -0.05
Ebf4Q8K4J2 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ebf4Q8K4J2 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ebf4Q8K4J2 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ebf4Q8K4J2 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ebf4Q8K4J2 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Ebf4Q8K4J2 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ebf4Q8K4J2 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ebf4Q8K4J2 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ebf4Q8K4J2 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC14.74□□□□□ -0.05
Ebf4Q8K4J2 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Ebf4Q8K4J2 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ebf4Q8K4J2 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ebf4Q8K4J2 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ebf4Q8K4J2 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ebf4Q8K4J2 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ebf4Q8K4J2 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ebf4Q8K4J2 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Ebf4Q8K4J2 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ebf4Q8K4J2 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ebf4Q8K4J2 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Ebf4Q8K4J2 Sybu-209ENSMUST00000228639 4113 ntBASIC14.74□□□□□ -0.05
Ebf4Q8K4J2 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ebf4Q8K4J2 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ebf4Q8K4J2 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ebf4Q8K4J2 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ebf4Q8K4J2 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Ebf4Q8K4J2 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Ebf4Q8K4J2 Gm18025-201ENSMUST00000221733 862 ntBASIC14.74□□□□□ -0.05
Ebf4Q8K4J2 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Ebf4Q8K4J2 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ebf4Q8K4J2 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ebf4Q8K4J2 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ebf4Q8K4J2 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ebf4Q8K4J2 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ebf4Q8K4J2 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ebf4Q8K4J2 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ebf4Q8K4J2 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Ebf4Q8K4J2 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ebf4Q8K4J2 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ebf4Q8K4J2 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Ebf4Q8K4J2 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC14.74□□□□□ -0.05
Ebf4Q8K4J2 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ebf4Q8K4J2 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ebf4Q8K4J2 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ebf4Q8K4J2 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ebf4Q8K4J2 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ebf4Q8K4J2 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC14.73□□□□□ -0.05
Ebf4Q8K4J2 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Ebf4Q8K4J2 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC14.73□□□□□ -0.05
Ebf4Q8K4J2 Gm4968-201ENSMUST00000071458 858 ntBASIC14.73□□□□□ -0.05
Ebf4Q8K4J2 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Ebf4Q8K4J2 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms