Protein–RNA interactions for Protein: Q8CI96

Clip4, CAP-Gly domain-containing linker protein 4, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip4Q8CI96 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Clip4Q8CI96 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC16.29■□□□□ 0.2
Clip4Q8CI96 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Clip4Q8CI96 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Clip4Q8CI96 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Clip4Q8CI96 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Clip4Q8CI96 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Clip4Q8CI96 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Clip4Q8CI96 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Clip4Q8CI96 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Clip4Q8CI96 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Clip4Q8CI96 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Clip4Q8CI96 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Clip4Q8CI96 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
Clip4Q8CI96 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Clip4Q8CI96 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Clip4Q8CI96 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Clip4Q8CI96 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Clip4Q8CI96 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Clip4Q8CI96 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Clip4Q8CI96 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Clip4Q8CI96 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Clip4Q8CI96 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Clip4Q8CI96 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Clip4Q8CI96 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC16.28■□□□□ 0.2
Clip4Q8CI96 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC16.28■□□□□ 0.2
Clip4Q8CI96 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Clip4Q8CI96 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Clip4Q8CI96 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Clip4Q8CI96 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Clip4Q8CI96 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
Clip4Q8CI96 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Clip4Q8CI96 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Clip4Q8CI96 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Clip4Q8CI96 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Clip4Q8CI96 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Clip4Q8CI96 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC16.28■□□□□ 0.2
Clip4Q8CI96 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Clip4Q8CI96 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Clip4Q8CI96 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Clip4Q8CI96 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Clip4Q8CI96 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Clip4Q8CI96 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Clip4Q8CI96 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Clip4Q8CI96 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Clip4Q8CI96 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Clip4Q8CI96 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Clip4Q8CI96 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Clip4Q8CI96 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Clip4Q8CI96 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Clip4Q8CI96 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Clip4Q8CI96 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Clip4Q8CI96 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Clip4Q8CI96 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Clip4Q8CI96 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Clip4Q8CI96 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Clip4Q8CI96 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Clip4Q8CI96 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Clip4Q8CI96 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC16.27■□□□□ 0.19
Clip4Q8CI96 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Clip4Q8CI96 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
Clip4Q8CI96 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Clip4Q8CI96 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
Clip4Q8CI96 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Clip4Q8CI96 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Clip4Q8CI96 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC16.26■□□□□ 0.19
Clip4Q8CI96 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Clip4Q8CI96 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC16.26■□□□□ 0.19
Clip4Q8CI96 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Clip4Q8CI96 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Clip4Q8CI96 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Clip4Q8CI96 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Clip4Q8CI96 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC16.26■□□□□ 0.19
Clip4Q8CI96 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC16.26■□□□□ 0.19
Clip4Q8CI96 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Clip4Q8CI96 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Clip4Q8CI96 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Clip4Q8CI96 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Clip4Q8CI96 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Clip4Q8CI96 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Clip4Q8CI96 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Clip4Q8CI96 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Clip4Q8CI96 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Clip4Q8CI96 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC16.26■□□□□ 0.19
Clip4Q8CI96 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Clip4Q8CI96 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC16.25■□□□□ 0.19
Clip4Q8CI96 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Clip4Q8CI96 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Clip4Q8CI96 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Clip4Q8CI96 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Clip4Q8CI96 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Clip4Q8CI96 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Clip4Q8CI96 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Clip4Q8CI96 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
Clip4Q8CI96 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC16.25■□□□□ 0.19
Clip4Q8CI96 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC16.25■□□□□ 0.19
Clip4Q8CI96 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Clip4Q8CI96 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Clip4Q8CI96 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Clip4Q8CI96 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms