Protein–RNA interactions for Protein: Q8CHP0

Zc3h3, Zinc finger CCCH domain-containing protein 3, mousemouse

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3h3Q8CHP0 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Zc3h3Q8CHP0 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Zc3h3Q8CHP0 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Zc3h3Q8CHP0 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Zc3h3Q8CHP0 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Zc3h3Q8CHP0 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Zc3h3Q8CHP0 AC132265.1-201ENSMUST00000219233 1665 ntBASIC15.73■□□□□ 0.11
Zc3h3Q8CHP0 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Zc3h3Q8CHP0 AC159621.2-201ENSMUST00000223519 1326 ntBASIC15.73■□□□□ 0.11
Zc3h3Q8CHP0 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Zc3h3Q8CHP0 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Zc3h3Q8CHP0 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Zc3h3Q8CHP0 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Zc3h3Q8CHP0 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Zc3h3Q8CHP0 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC15.73■□□□□ 0.11
Zc3h3Q8CHP0 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Zc3h3Q8CHP0 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Zc3h3Q8CHP0 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Zc3h3Q8CHP0 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Zc3h3Q8CHP0 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Zc3h3Q8CHP0 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Zc3h3Q8CHP0 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Zc3h3Q8CHP0 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC15.73■□□□□ 0.11
Zc3h3Q8CHP0 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Zc3h3Q8CHP0 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Zc3h3Q8CHP0 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Zc3h3Q8CHP0 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Zc3h3Q8CHP0 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Zc3h3Q8CHP0 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Zc3h3Q8CHP0 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Zc3h3Q8CHP0 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Zc3h3Q8CHP0 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Zc3h3Q8CHP0 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
Zc3h3Q8CHP0 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Zc3h3Q8CHP0 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC15.72■□□□□ 0.11
Zc3h3Q8CHP0 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Zc3h3Q8CHP0 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Zc3h3Q8CHP0 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Zc3h3Q8CHP0 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Zc3h3Q8CHP0 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Zc3h3Q8CHP0 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Zc3h3Q8CHP0 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Zc3h3Q8CHP0 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Zc3h3Q8CHP0 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Zc3h3Q8CHP0 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Zc3h3Q8CHP0 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Zc3h3Q8CHP0 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Zc3h3Q8CHP0 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Zc3h3Q8CHP0 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Zc3h3Q8CHP0 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC15.71■□□□□ 0.11
Zc3h3Q8CHP0 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Zc3h3Q8CHP0 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC15.71■□□□□ 0.11
Zc3h3Q8CHP0 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Zc3h3Q8CHP0 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Zc3h3Q8CHP0 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Zc3h3Q8CHP0 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Zc3h3Q8CHP0 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC15.71■□□□□ 0.11
Zc3h3Q8CHP0 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Zc3h3Q8CHP0 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC15.71■□□□□ 0.11
Zc3h3Q8CHP0 Gm8344-201ENSMUST00000119813 856 ntBASIC15.71■□□□□ 0.11
Zc3h3Q8CHP0 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Zc3h3Q8CHP0 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC15.71■□□□□ 0.11
Zc3h3Q8CHP0 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC15.71■□□□□ 0.11
Zc3h3Q8CHP0 AC151836.1-202ENSMUST00000226259 753 ntBASIC15.71■□□□□ 0.11
Zc3h3Q8CHP0 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Zc3h3Q8CHP0 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Zc3h3Q8CHP0 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Zc3h3Q8CHP0 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Zc3h3Q8CHP0 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Zc3h3Q8CHP0 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Zc3h3Q8CHP0 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Zc3h3Q8CHP0 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Zc3h3Q8CHP0 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
Zc3h3Q8CHP0 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Zc3h3Q8CHP0 Gm5366-201ENSMUST00000215494 1338 ntBASIC15.7■□□□□ 0.1
Zc3h3Q8CHP0 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Zc3h3Q8CHP0 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Zc3h3Q8CHP0 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Zc3h3Q8CHP0 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Zc3h3Q8CHP0 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Zc3h3Q8CHP0 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Zc3h3Q8CHP0 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Zc3h3Q8CHP0 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC15.7■□□□□ 0.1
Zc3h3Q8CHP0 Gm15358-201ENSMUST00000119249 520 ntBASIC15.7■□□□□ 0.1
Zc3h3Q8CHP0 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Zc3h3Q8CHP0 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Zc3h3Q8CHP0 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Zc3h3Q8CHP0 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC15.7■□□□□ 0.1
Zc3h3Q8CHP0 Gm20553-201ENSMUST00000204205 844 ntBASIC15.7■□□□□ 0.1
Zc3h3Q8CHP0 AC107711.5-202ENSMUST00000226429 702 ntBASIC15.7■□□□□ 0.1
Zc3h3Q8CHP0 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC15.7■□□□□ 0.1
Zc3h3Q8CHP0 Gpr146-202ENSMUST00000053120 1040 ntBASIC15.7■□□□□ 0.1
Zc3h3Q8CHP0 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Zc3h3Q8CHP0 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Zc3h3Q8CHP0 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Zc3h3Q8CHP0 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Zc3h3Q8CHP0 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Zc3h3Q8CHP0 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Zc3h3Q8CHP0 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Zc3h3Q8CHP0 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms