Protein–RNA interactions for Protein: Q8CHD8

Rab11fip3, Rab11 family-interacting protein 3, mousemouse

Predictions only

Length 1,047 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip3Q8CHD8 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Rab11fip3Q8CHD8 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC20.82■□□□□ 0.92
Rab11fip3Q8CHD8 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC20.82■□□□□ 0.92
Rab11fip3Q8CHD8 Gm18206-201ENSMUST00000207027 926 ntBASIC20.82■□□□□ 0.92
Rab11fip3Q8CHD8 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC20.82■□□□□ 0.92
Rab11fip3Q8CHD8 Gm18622-201ENSMUST00000219361 595 ntBASIC20.82■□□□□ 0.92
Rab11fip3Q8CHD8 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Rab11fip3Q8CHD8 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rab11fip3Q8CHD8 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rab11fip3Q8CHD8 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Rab11fip3Q8CHD8 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Rab11fip3Q8CHD8 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rab11fip3Q8CHD8 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rab11fip3Q8CHD8 AC115863.1-201ENSMUST00000214815 1813 ntBASIC20.81■□□□□ 0.92
Rab11fip3Q8CHD8 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rab11fip3Q8CHD8 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rab11fip3Q8CHD8 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rab11fip3Q8CHD8 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC20.81■□□□□ 0.92
Rab11fip3Q8CHD8 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC20.81■□□□□ 0.92
Rab11fip3Q8CHD8 AV026068-213ENSMUST00000223675 1171 ntBASIC20.81■□□□□ 0.92
Rab11fip3Q8CHD8 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rab11fip3Q8CHD8 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rab11fip3Q8CHD8 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rab11fip3Q8CHD8 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rab11fip3Q8CHD8 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Rab11fip3Q8CHD8 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Rab11fip3Q8CHD8 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rab11fip3Q8CHD8 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rab11fip3Q8CHD8 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rab11fip3Q8CHD8 Gm45774-201ENSMUST00000211992 2665 ntBASIC20.81■□□□□ 0.92
Rab11fip3Q8CHD8 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rab11fip3Q8CHD8 Gm3928-201ENSMUST00000121141 1307 ntBASIC20.8■□□□□ 0.92
Rab11fip3Q8CHD8 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Rab11fip3Q8CHD8 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rab11fip3Q8CHD8 Gm8784-201ENSMUST00000222096 1435 ntBASIC20.8■□□□□ 0.92
Rab11fip3Q8CHD8 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Rab11fip3Q8CHD8 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rab11fip3Q8CHD8 Gm7222-201ENSMUST00000117512 906 ntBASIC20.8■□□□□ 0.92
Rab11fip3Q8CHD8 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Rab11fip3Q8CHD8 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC20.8■□□□□ 0.92
Rab11fip3Q8CHD8 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Rab11fip3Q8CHD8 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rab11fip3Q8CHD8 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rab11fip3Q8CHD8 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rab11fip3Q8CHD8 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rab11fip3Q8CHD8 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rab11fip3Q8CHD8 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rab11fip3Q8CHD8 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Rab11fip3Q8CHD8 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rab11fip3Q8CHD8 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rab11fip3Q8CHD8 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Rab11fip3Q8CHD8 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rab11fip3Q8CHD8 Gm37500-201ENSMUST00000192059 1443 ntBASIC20.79■□□□□ 0.92
Rab11fip3Q8CHD8 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rab11fip3Q8CHD8 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rab11fip3Q8CHD8 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Rab11fip3Q8CHD8 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Rab11fip3Q8CHD8 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rab11fip3Q8CHD8 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC20.79■□□□□ 0.92
Rab11fip3Q8CHD8 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC20.79■□□□□ 0.92
Rab11fip3Q8CHD8 Gm6550-201ENSMUST00000187574 993 ntBASIC20.79■□□□□ 0.92
Rab11fip3Q8CHD8 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC20.79■□□□□ 0.92
Rab11fip3Q8CHD8 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Rab11fip3Q8CHD8 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rab11fip3Q8CHD8 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rab11fip3Q8CHD8 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rab11fip3Q8CHD8 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rab11fip3Q8CHD8 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Rab11fip3Q8CHD8 Gm45244-201ENSMUST00000211328 2200 ntBASIC20.78■□□□□ 0.92
Rab11fip3Q8CHD8 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rab11fip3Q8CHD8 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Rab11fip3Q8CHD8 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Rab11fip3Q8CHD8 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rab11fip3Q8CHD8 Gm15173-201ENSMUST00000122049 433 ntBASIC20.78■□□□□ 0.92
Rab11fip3Q8CHD8 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC20.78■□□□□ 0.92
Rab11fip3Q8CHD8 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC20.78■□□□□ 0.92
Rab11fip3Q8CHD8 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Rab11fip3Q8CHD8 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
Rab11fip3Q8CHD8 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rab11fip3Q8CHD8 Gm15743-202ENSMUST00000182690 1901 ntBASIC20.78■□□□□ 0.92
Rab11fip3Q8CHD8 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rab11fip3Q8CHD8 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rab11fip3Q8CHD8 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Rab11fip3Q8CHD8 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rab11fip3Q8CHD8 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rab11fip3Q8CHD8 AC154527.4-201ENSMUST00000224364 1667 ntBASIC20.77■□□□□ 0.92
Rab11fip3Q8CHD8 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Rab11fip3Q8CHD8 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rab11fip3Q8CHD8 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rab11fip3Q8CHD8 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Rab11fip3Q8CHD8 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rab11fip3Q8CHD8 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Rab11fip3Q8CHD8 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
Rab11fip3Q8CHD8 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rab11fip3Q8CHD8 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rab11fip3Q8CHD8 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rab11fip3Q8CHD8 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Rab11fip3Q8CHD8 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Rab11fip3Q8CHD8 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Rab11fip3Q8CHD8 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms