Protein–RNA interactions for Protein: Q8CGW4

Sox30, Transcription factor SOX-30, mousemouse

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox30Q8CGW4 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sox30Q8CGW4 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Sox30Q8CGW4 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sox30Q8CGW4 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC17.63■□□□□ 0.41
Sox30Q8CGW4 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC17.63■□□□□ 0.41
Sox30Q8CGW4 Gm13436-201ENSMUST00000120418 567 ntBASIC17.63■□□□□ 0.41
Sox30Q8CGW4 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Sox30Q8CGW4 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sox30Q8CGW4 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Sox30Q8CGW4 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC17.63■□□□□ 0.41
Sox30Q8CGW4 Gm9484-201ENSMUST00000195892 1159 ntBASIC17.63■□□□□ 0.41
Sox30Q8CGW4 Gm30025-201ENSMUST00000218555 728 ntBASIC17.63■□□□□ 0.41
Sox30Q8CGW4 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sox30Q8CGW4 Gm5417-201ENSMUST00000079706 384 ntBASIC17.63■□□□□ 0.41
Sox30Q8CGW4 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sox30Q8CGW4 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Sox30Q8CGW4 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC17.63■□□□□ 0.41
Sox30Q8CGW4 Gm43598-201ENSMUST00000202482 2479 ntBASIC17.63■□□□□ 0.41
Sox30Q8CGW4 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sox30Q8CGW4 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sox30Q8CGW4 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
Sox30Q8CGW4 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sox30Q8CGW4 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sox30Q8CGW4 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
Sox30Q8CGW4 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
Sox30Q8CGW4 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Sox30Q8CGW4 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Sox30Q8CGW4 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sox30Q8CGW4 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sox30Q8CGW4 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Sox30Q8CGW4 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC17.63■□□□□ 0.41
Sox30Q8CGW4 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sox30Q8CGW4 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Sox30Q8CGW4 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Sox30Q8CGW4 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Sox30Q8CGW4 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sox30Q8CGW4 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sox30Q8CGW4 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sox30Q8CGW4 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sox30Q8CGW4 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC17.62■□□□□ 0.41
Sox30Q8CGW4 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC17.62■□□□□ 0.41
Sox30Q8CGW4 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC17.62■□□□□ 0.41
Sox30Q8CGW4 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC17.62■□□□□ 0.41
Sox30Q8CGW4 AC122351.1-201ENSMUST00000220467 126 ntBASIC17.62■□□□□ 0.41
Sox30Q8CGW4 Arhgef33-211ENSMUST00000225658 473 ntBASIC17.62■□□□□ 0.41
Sox30Q8CGW4 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Sox30Q8CGW4 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sox30Q8CGW4 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sox30Q8CGW4 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Sox30Q8CGW4 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sox30Q8CGW4 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Sox30Q8CGW4 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sox30Q8CGW4 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sox30Q8CGW4 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sox30Q8CGW4 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Sox30Q8CGW4 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Sox30Q8CGW4 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sox30Q8CGW4 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC17.61■□□□□ 0.41
Sox30Q8CGW4 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sox30Q8CGW4 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sox30Q8CGW4 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Sox30Q8CGW4 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sox30Q8CGW4 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
Sox30Q8CGW4 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sox30Q8CGW4 Mir6404-201ENSMUST00000183699 94 ntBASIC17.61■□□□□ 0.41
Sox30Q8CGW4 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC17.61■□□□□ 0.41
Sox30Q8CGW4 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sox30Q8CGW4 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Sox30Q8CGW4 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
Sox30Q8CGW4 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sox30Q8CGW4 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Sox30Q8CGW4 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC17.61■□□□□ 0.41
Sox30Q8CGW4 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC17.61■□□□□ 0.41
Sox30Q8CGW4 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sox30Q8CGW4 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sox30Q8CGW4 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sox30Q8CGW4 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Sox30Q8CGW4 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sox30Q8CGW4 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Sox30Q8CGW4 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sox30Q8CGW4 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Sox30Q8CGW4 Gm44430-201ENSMUST00000203376 995 ntBASIC17.6■□□□□ 0.41
Sox30Q8CGW4 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sox30Q8CGW4 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sox30Q8CGW4 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC17.6■□□□□ 0.41
Sox30Q8CGW4 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sox30Q8CGW4 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Sox30Q8CGW4 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sox30Q8CGW4 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sox30Q8CGW4 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Sox30Q8CGW4 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Sox30Q8CGW4 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sox30Q8CGW4 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sox30Q8CGW4 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sox30Q8CGW4 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC17.59■□□□□ 0.41
Sox30Q8CGW4 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC17.59■□□□□ 0.41
Sox30Q8CGW4 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC17.59■□□□□ 0.41
Sox30Q8CGW4 Gm13559-201ENSMUST00000120476 863 ntBASIC17.59■□□□□ 0.41
Sox30Q8CGW4 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC17.59■□□□□ 0.41
Sox30Q8CGW4 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms