Protein–RNA interactions for Protein: Q8CGV4

Rdh1, MCG140848, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh1Q8CGV4 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rdh1Q8CGV4 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rdh1Q8CGV4 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rdh1Q8CGV4 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rdh1Q8CGV4 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rdh1Q8CGV4 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC15.63■□□□□ 0.09
Rdh1Q8CGV4 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC15.63■□□□□ 0.09
Rdh1Q8CGV4 Gm9449-201ENSMUST00000207265 1011 ntBASIC15.63■□□□□ 0.09
Rdh1Q8CGV4 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC15.63■□□□□ 0.09
Rdh1Q8CGV4 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Rdh1Q8CGV4 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Rdh1Q8CGV4 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rdh1Q8CGV4 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Rdh1Q8CGV4 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rdh1Q8CGV4 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rdh1Q8CGV4 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Rdh1Q8CGV4 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rdh1Q8CGV4 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Rdh1Q8CGV4 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC15.62■□□□□ 0.09
Rdh1Q8CGV4 Ddx41-204ENSMUST00000224765 2199 ntBASIC15.62■□□□□ 0.09
Rdh1Q8CGV4 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC15.62■□□□□ 0.09
Rdh1Q8CGV4 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Rdh1Q8CGV4 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rdh1Q8CGV4 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rdh1Q8CGV4 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Rdh1Q8CGV4 Gm2651-201ENSMUST00000203560 838 ntBASIC15.62■□□□□ 0.09
Rdh1Q8CGV4 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC15.62■□□□□ 0.09
Rdh1Q8CGV4 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rdh1Q8CGV4 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rdh1Q8CGV4 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Rdh1Q8CGV4 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Rdh1Q8CGV4 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rdh1Q8CGV4 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Rdh1Q8CGV4 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC15.62■□□□□ 0.09
Rdh1Q8CGV4 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rdh1Q8CGV4 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Rdh1Q8CGV4 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Rdh1Q8CGV4 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rdh1Q8CGV4 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Rdh1Q8CGV4 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC15.61■□□□□ 0.09
Rdh1Q8CGV4 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Rdh1Q8CGV4 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rdh1Q8CGV4 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rdh1Q8CGV4 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rdh1Q8CGV4 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rdh1Q8CGV4 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rdh1Q8CGV4 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rdh1Q8CGV4 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rdh1Q8CGV4 Gm25990-201ENSMUST00000102440 86 ntBASIC15.61■□□□□ 0.09
Rdh1Q8CGV4 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rdh1Q8CGV4 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rdh1Q8CGV4 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rdh1Q8CGV4 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Rdh1Q8CGV4 Mir5131-201ENSMUST00000175426 93 ntBASIC15.61■□□□□ 0.09
Rdh1Q8CGV4 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Rdh1Q8CGV4 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC15.61■□□□□ 0.09
Rdh1Q8CGV4 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC15.61■□□□□ 0.09
Rdh1Q8CGV4 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC15.61■□□□□ 0.09
Rdh1Q8CGV4 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Rdh1Q8CGV4 Gm37584-201ENSMUST00000193595 1290 ntBASIC15.61■□□□□ 0.09
Rdh1Q8CGV4 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC15.61■□□□□ 0.09
Rdh1Q8CGV4 Gm10060-201ENSMUST00000212002 111 ntBASIC15.61■□□□□ 0.09
Rdh1Q8CGV4 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rdh1Q8CGV4 Gm26596-201ENSMUST00000180464 2655 ntBASIC15.61■□□□□ 0.09
Rdh1Q8CGV4 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC15.61■□□□□ 0.09
Rdh1Q8CGV4 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rdh1Q8CGV4 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rdh1Q8CGV4 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Rdh1Q8CGV4 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Rdh1Q8CGV4 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rdh1Q8CGV4 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Rdh1Q8CGV4 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rdh1Q8CGV4 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rdh1Q8CGV4 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Rdh1Q8CGV4 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rdh1Q8CGV4 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rdh1Q8CGV4 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Rdh1Q8CGV4 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rdh1Q8CGV4 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rdh1Q8CGV4 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rdh1Q8CGV4 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rdh1Q8CGV4 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rdh1Q8CGV4 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rdh1Q8CGV4 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Rdh1Q8CGV4 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rdh1Q8CGV4 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rdh1Q8CGV4 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC15.6■□□□□ 0.09
Rdh1Q8CGV4 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Rdh1Q8CGV4 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC15.6■□□□□ 0.09
Rdh1Q8CGV4 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Rdh1Q8CGV4 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC15.6■□□□□ 0.09
Rdh1Q8CGV4 Gm8655-201ENSMUST00000221159 852 ntBASIC15.6■□□□□ 0.09
Rdh1Q8CGV4 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rdh1Q8CGV4 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rdh1Q8CGV4 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rdh1Q8CGV4 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Rdh1Q8CGV4 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rdh1Q8CGV4 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rdh1Q8CGV4 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rdh1Q8CGV4 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 74.9 ms