Protein–RNA interactions for Protein: Q8CGM2

Rp1l1, Retinitis pigmentosa 1-like 1 protein, mousemouse

Predictions only

Length 1,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rp1l1Q8CGM2 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rp1l1Q8CGM2 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Rp1l1Q8CGM2 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Rp1l1Q8CGM2 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC16.66■□□□□ 0.26
Rp1l1Q8CGM2 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rp1l1Q8CGM2 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Rp1l1Q8CGM2 Gm6257-201ENSMUST00000163864 910 ntBASIC16.66■□□□□ 0.26
Rp1l1Q8CGM2 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Rp1l1Q8CGM2 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Rp1l1Q8CGM2 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rp1l1Q8CGM2 Hist1h2al-201ENSMUST00000091708 339 ntBASIC16.66■□□□□ 0.26
Rp1l1Q8CGM2 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Rp1l1Q8CGM2 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rp1l1Q8CGM2 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC16.66■□□□□ 0.26
Rp1l1Q8CGM2 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rp1l1Q8CGM2 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rp1l1Q8CGM2 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rp1l1Q8CGM2 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rp1l1Q8CGM2 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Rp1l1Q8CGM2 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Rp1l1Q8CGM2 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC16.65■□□□□ 0.26
Rp1l1Q8CGM2 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Rp1l1Q8CGM2 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC16.65■□□□□ 0.26
Rp1l1Q8CGM2 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rp1l1Q8CGM2 AC122024.2-201ENSMUST00000220086 871 ntBASIC16.65■□□□□ 0.26
Rp1l1Q8CGM2 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rp1l1Q8CGM2 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rp1l1Q8CGM2 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Rp1l1Q8CGM2 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rp1l1Q8CGM2 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC16.65■□□□□ 0.26
Rp1l1Q8CGM2 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rp1l1Q8CGM2 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rp1l1Q8CGM2 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rp1l1Q8CGM2 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Rp1l1Q8CGM2 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rp1l1Q8CGM2 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Rp1l1Q8CGM2 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC16.65■□□□□ 0.26
Rp1l1Q8CGM2 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rp1l1Q8CGM2 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rp1l1Q8CGM2 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rp1l1Q8CGM2 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Rp1l1Q8CGM2 Gm7336-201ENSMUST00000107041 1232 ntBASIC16.65■□□□□ 0.26
Rp1l1Q8CGM2 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rp1l1Q8CGM2 Gm12008-201ENSMUST00000117791 755 ntBASIC16.65■□□□□ 0.26
Rp1l1Q8CGM2 Gm13223-201ENSMUST00000118609 747 ntBASIC16.65■□□□□ 0.26
Rp1l1Q8CGM2 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Rp1l1Q8CGM2 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Rp1l1Q8CGM2 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rp1l1Q8CGM2 AC126250.1-201ENSMUST00000228343 1768 ntBASIC16.64■□□□□ 0.25
Rp1l1Q8CGM2 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC16.64■□□□□ 0.25
Rp1l1Q8CGM2 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rp1l1Q8CGM2 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rp1l1Q8CGM2 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rp1l1Q8CGM2 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rp1l1Q8CGM2 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rp1l1Q8CGM2 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC16.64■□□□□ 0.25
Rp1l1Q8CGM2 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Rp1l1Q8CGM2 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rp1l1Q8CGM2 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rp1l1Q8CGM2 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rp1l1Q8CGM2 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
Rp1l1Q8CGM2 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rp1l1Q8CGM2 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Rp1l1Q8CGM2 Gm38294-201ENSMUST00000192831 381 ntBASIC16.63■□□□□ 0.25
Rp1l1Q8CGM2 Gm37277-201ENSMUST00000194052 1111 ntBASIC16.63■□□□□ 0.25
Rp1l1Q8CGM2 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Rp1l1Q8CGM2 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Rp1l1Q8CGM2 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rp1l1Q8CGM2 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Rp1l1Q8CGM2 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Rp1l1Q8CGM2 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rp1l1Q8CGM2 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Rp1l1Q8CGM2 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rp1l1Q8CGM2 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Rp1l1Q8CGM2 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC16.63■□□□□ 0.25
Rp1l1Q8CGM2 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rp1l1Q8CGM2 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rp1l1Q8CGM2 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rp1l1Q8CGM2 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Rp1l1Q8CGM2 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Rp1l1Q8CGM2 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Rp1l1Q8CGM2 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Rp1l1Q8CGM2 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rp1l1Q8CGM2 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Rp1l1Q8CGM2 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rp1l1Q8CGM2 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rp1l1Q8CGM2 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rp1l1Q8CGM2 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rp1l1Q8CGM2 Gm16198-201ENSMUST00000118766 670 ntBASIC16.62■□□□□ 0.25
Rp1l1Q8CGM2 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC16.62■□□□□ 0.25
Rp1l1Q8CGM2 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC16.62■□□□□ 0.25
Rp1l1Q8CGM2 Gm22175-201ENSMUST00000175007 78 ntBASIC16.62■□□□□ 0.25
Rp1l1Q8CGM2 Gm5866-201ENSMUST00000177881 973 ntBASIC16.62■□□□□ 0.25
Rp1l1Q8CGM2 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC16.62■□□□□ 0.25
Rp1l1Q8CGM2 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC16.62■□□□□ 0.25
Rp1l1Q8CGM2 Rbfox2-208ENSMUST00000227930 1218 ntBASIC16.62■□□□□ 0.25
Rp1l1Q8CGM2 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rp1l1Q8CGM2 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rp1l1Q8CGM2 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Rp1l1Q8CGM2 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms