Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Ccdc38Q8CDN8 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
Ccdc38Q8CDN8 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ccdc38Q8CDN8 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Ccdc38Q8CDN8 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ccdc38Q8CDN8 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC17.93■□□□□ 0.46
Ccdc38Q8CDN8 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc38Q8CDN8 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc38Q8CDN8 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc38Q8CDN8 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc38Q8CDN8 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc38Q8CDN8 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc38Q8CDN8 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc38Q8CDN8 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc38Q8CDN8 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Ccdc38Q8CDN8 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC17.93■□□□□ 0.46
Ccdc38Q8CDN8 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc38Q8CDN8 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC17.93■□□□□ 0.46
Ccdc38Q8CDN8 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc38Q8CDN8 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC17.93■□□□□ 0.46
Ccdc38Q8CDN8 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC17.93■□□□□ 0.46
Ccdc38Q8CDN8 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC17.93■□□□□ 0.46
Ccdc38Q8CDN8 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc38Q8CDN8 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc38Q8CDN8 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc38Q8CDN8 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Ccdc38Q8CDN8 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc38Q8CDN8 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC17.93■□□□□ 0.46
Ccdc38Q8CDN8 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc38Q8CDN8 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Ccdc38Q8CDN8 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc38Q8CDN8 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC17.92■□□□□ 0.46
Ccdc38Q8CDN8 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Ccdc38Q8CDN8 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc38Q8CDN8 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc38Q8CDN8 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc38Q8CDN8 Gm11355-201ENSMUST00000121120 306 ntBASIC17.92■□□□□ 0.46
Ccdc38Q8CDN8 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC17.92■□□□□ 0.46
Ccdc38Q8CDN8 Gm18101-201ENSMUST00000215769 548 ntBASIC17.92■□□□□ 0.46
Ccdc38Q8CDN8 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Ccdc38Q8CDN8 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc38Q8CDN8 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc38Q8CDN8 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC17.92■□□□□ 0.46
Ccdc38Q8CDN8 Ntrk2-205ENSMUST00000224402 2284 ntBASIC17.92■□□□□ 0.46
Ccdc38Q8CDN8 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc38Q8CDN8 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc38Q8CDN8 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC17.92■□□□□ 0.46
Ccdc38Q8CDN8 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc38Q8CDN8 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc38Q8CDN8 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc38Q8CDN8 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc38Q8CDN8 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc38Q8CDN8 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc38Q8CDN8 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC17.91■□□□□ 0.46
Ccdc38Q8CDN8 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc38Q8CDN8 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc38Q8CDN8 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc38Q8CDN8 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC17.91■□□□□ 0.46
Ccdc38Q8CDN8 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc38Q8CDN8 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc38Q8CDN8 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Ccdc38Q8CDN8 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc38Q8CDN8 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc38Q8CDN8 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc38Q8CDN8 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc38Q8CDN8 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc38Q8CDN8 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc38Q8CDN8 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc38Q8CDN8 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Ccdc38Q8CDN8 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc38Q8CDN8 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
Ccdc38Q8CDN8 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC17.91■□□□□ 0.46
Ccdc38Q8CDN8 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc38Q8CDN8 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc38Q8CDN8 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc38Q8CDN8 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc38Q8CDN8 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC17.9■□□□□ 0.46
Ccdc38Q8CDN8 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Ccdc38Q8CDN8 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc38Q8CDN8 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc38Q8CDN8 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc38Q8CDN8 Rbfox2-206ENSMUST00000227314 1810 ntBASIC17.9■□□□□ 0.46
Ccdc38Q8CDN8 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc38Q8CDN8 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc38Q8CDN8 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc38Q8CDN8 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC17.9■□□□□ 0.46
Ccdc38Q8CDN8 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc38Q8CDN8 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc38Q8CDN8 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc38Q8CDN8 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC17.89■□□□□ 0.46
Ccdc38Q8CDN8 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Ccdc38Q8CDN8 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ccdc38Q8CDN8 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Ccdc38Q8CDN8 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC17.89■□□□□ 0.45
Ccdc38Q8CDN8 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Ccdc38Q8CDN8 Krtap5-1-202ENSMUST00000188274 742 ntBASIC17.89■□□□□ 0.45
Ccdc38Q8CDN8 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ccdc38Q8CDN8 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ccdc38Q8CDN8 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ccdc38Q8CDN8 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms