Protein–RNA interactions for Protein: Q8CCF0

Prpf31, U4/U6 small nuclear ribonucleoprotein Prp31, mousemouse

Known RBP Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf31Q8CCF0 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Prpf31Q8CCF0 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Prpf31Q8CCF0 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Prpf31Q8CCF0 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC17.6■□□□□ 0.41
Prpf31Q8CCF0 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC17.6■□□□□ 0.41
Prpf31Q8CCF0 Gm8349-201ENSMUST00000182720 1003 ntBASIC17.6■□□□□ 0.41
Prpf31Q8CCF0 Gm13830-205ENSMUST00000201195 1155 ntBASIC17.6■□□□□ 0.41
Prpf31Q8CCF0 Gm7506-201ENSMUST00000207758 815 ntBASIC17.6■□□□□ 0.41
Prpf31Q8CCF0 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC17.6■□□□□ 0.41
Prpf31Q8CCF0 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Prpf31Q8CCF0 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC17.6■□□□□ 0.41
Prpf31Q8CCF0 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Prpf31Q8CCF0 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Prpf31Q8CCF0 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Prpf31Q8CCF0 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Prpf31Q8CCF0 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC17.6■□□□□ 0.41
Prpf31Q8CCF0 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Prpf31Q8CCF0 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Prpf31Q8CCF0 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Prpf31Q8CCF0 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Prpf31Q8CCF0 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Prpf31Q8CCF0 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
Prpf31Q8CCF0 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Prpf31Q8CCF0 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC17.59■□□□□ 0.41
Prpf31Q8CCF0 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Prpf31Q8CCF0 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Prpf31Q8CCF0 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Prpf31Q8CCF0 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC17.59■□□□□ 0.41
Prpf31Q8CCF0 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Prpf31Q8CCF0 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Prpf31Q8CCF0 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC17.59■□□□□ 0.41
Prpf31Q8CCF0 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Prpf31Q8CCF0 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Prpf31Q8CCF0 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Prpf31Q8CCF0 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Prpf31Q8CCF0 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Prpf31Q8CCF0 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Prpf31Q8CCF0 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Prpf31Q8CCF0 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Prpf31Q8CCF0 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC17.59■□□□□ 0.41
Prpf31Q8CCF0 Gm7292-201ENSMUST00000194706 2527 ntBASIC17.59■□□□□ 0.41
Prpf31Q8CCF0 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC17.59■□□□□ 0.41
Prpf31Q8CCF0 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Prpf31Q8CCF0 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Prpf31Q8CCF0 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
Prpf31Q8CCF0 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.41
Prpf31Q8CCF0 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Prpf31Q8CCF0 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
Prpf31Q8CCF0 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
Prpf31Q8CCF0 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Prpf31Q8CCF0 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Prpf31Q8CCF0 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Prpf31Q8CCF0 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Prpf31Q8CCF0 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC17.58■□□□□ 0.4
Prpf31Q8CCF0 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Prpf31Q8CCF0 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Prpf31Q8CCF0 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Prpf31Q8CCF0 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
Prpf31Q8CCF0 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Prpf31Q8CCF0 Gm6296-201ENSMUST00000222599 943 ntBASIC17.58■□□□□ 0.4
Prpf31Q8CCF0 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Prpf31Q8CCF0 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Prpf31Q8CCF0 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Prpf31Q8CCF0 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.4
Prpf31Q8CCF0 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Prpf31Q8CCF0 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Prpf31Q8CCF0 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Prpf31Q8CCF0 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC17.57■□□□□ 0.4
Prpf31Q8CCF0 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Prpf31Q8CCF0 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Prpf31Q8CCF0 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC17.57■□□□□ 0.4
Prpf31Q8CCF0 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Prpf31Q8CCF0 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Prpf31Q8CCF0 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Prpf31Q8CCF0 Gm44357-201ENSMUST00000195897 142 ntBASIC17.57■□□□□ 0.4
Prpf31Q8CCF0 Gm19658-201ENSMUST00000196231 138 ntBASIC17.57■□□□□ 0.4
Prpf31Q8CCF0 Gm44367-201ENSMUST00000196836 138 ntBASIC17.57■□□□□ 0.4
Prpf31Q8CCF0 Gm44350-201ENSMUST00000197197 138 ntBASIC17.57■□□□□ 0.4
Prpf31Q8CCF0 Gm44390-201ENSMUST00000197533 144 ntBASIC17.57■□□□□ 0.4
Prpf31Q8CCF0 Gm44313-201ENSMUST00000198018 138 ntBASIC17.57■□□□□ 0.4
Prpf31Q8CCF0 Gm44486-201ENSMUST00000198508 138 ntBASIC17.57■□□□□ 0.4
Prpf31Q8CCF0 Gm44314-201ENSMUST00000199263 138 ntBASIC17.57■□□□□ 0.4
Prpf31Q8CCF0 Gm44394-201ENSMUST00000199558 138 ntBASIC17.57■□□□□ 0.4
Prpf31Q8CCF0 Gm44484-201ENSMUST00000199873 138 ntBASIC17.57■□□□□ 0.4
Prpf31Q8CCF0 Gm44466-201ENSMUST00000200264 138 ntBASIC17.57■□□□□ 0.4
Prpf31Q8CCF0 Gm44359-201ENSMUST00000200671 138 ntBASIC17.57■□□□□ 0.4
Prpf31Q8CCF0 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC17.57■□□□□ 0.4
Prpf31Q8CCF0 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC17.57■□□□□ 0.4
Prpf31Q8CCF0 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC17.57■□□□□ 0.4
Prpf31Q8CCF0 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Prpf31Q8CCF0 Rps4l-201ENSMUST00000071745 943 ntBASIC17.57■□□□□ 0.4
Prpf31Q8CCF0 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Prpf31Q8CCF0 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC17.57■□□□□ 0.4
Prpf31Q8CCF0 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Prpf31Q8CCF0 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Prpf31Q8CCF0 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Prpf31Q8CCF0 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Prpf31Q8CCF0 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Prpf31Q8CCF0 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Prpf31Q8CCF0 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms