Protein–RNA interactions for Protein: Q8CA71

Shisa4, Protein shisa-4, mousemouse

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa4Q8CA71 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Shisa4Q8CA71 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Shisa4Q8CA71 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
Shisa4Q8CA71 Gm5712-201ENSMUST00000199748 1043 ntBASIC18.7■□□□□ 0.58
Shisa4Q8CA71 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Shisa4Q8CA71 AC132104.2-201ENSMUST00000215011 266 ntBASIC18.7■□□□□ 0.58
Shisa4Q8CA71 Gm8784-201ENSMUST00000222096 1435 ntBASIC18.7■□□□□ 0.58
Shisa4Q8CA71 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Shisa4Q8CA71 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC18.7■□□□□ 0.58
Shisa4Q8CA71 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC18.7■□□□□ 0.58
Shisa4Q8CA71 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Shisa4Q8CA71 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Shisa4Q8CA71 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Shisa4Q8CA71 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Shisa4Q8CA71 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Shisa4Q8CA71 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Shisa4Q8CA71 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Shisa4Q8CA71 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Shisa4Q8CA71 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Shisa4Q8CA71 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Shisa4Q8CA71 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Shisa4Q8CA71 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Shisa4Q8CA71 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Shisa4Q8CA71 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC18.69■□□□□ 0.58
Shisa4Q8CA71 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Shisa4Q8CA71 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC18.69■□□□□ 0.58
Shisa4Q8CA71 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC18.69■□□□□ 0.58
Shisa4Q8CA71 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Shisa4Q8CA71 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Shisa4Q8CA71 Gm43073-201ENSMUST00000198200 1189 ntBASIC18.69■□□□□ 0.58
Shisa4Q8CA71 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Shisa4Q8CA71 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Shisa4Q8CA71 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Shisa4Q8CA71 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Shisa4Q8CA71 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC18.69■□□□□ 0.58
Shisa4Q8CA71 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Shisa4Q8CA71 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC18.68■□□□□ 0.58
Shisa4Q8CA71 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Shisa4Q8CA71 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC18.68■□□□□ 0.58
Shisa4Q8CA71 Gm4459-201ENSMUST00000118750 468 ntBASIC18.68■□□□□ 0.58
Shisa4Q8CA71 Gm27525-201ENSMUST00000184465 107 ntBASIC18.68■□□□□ 0.58
Shisa4Q8CA71 Gm43347-201ENSMUST00000200226 580 ntBASIC18.68■□□□□ 0.58
Shisa4Q8CA71 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Shisa4Q8CA71 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
Shisa4Q8CA71 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Shisa4Q8CA71 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Shisa4Q8CA71 AC069562.2-201ENSMUST00000224644 2146 ntBASIC18.68■□□□□ 0.58
Shisa4Q8CA71 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Shisa4Q8CA71 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Shisa4Q8CA71 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
Shisa4Q8CA71 Gm38327-201ENSMUST00000195852 1755 ntBASIC18.68■□□□□ 0.58
Shisa4Q8CA71 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC18.68■□□□□ 0.58
Shisa4Q8CA71 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Shisa4Q8CA71 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Shisa4Q8CA71 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Shisa4Q8CA71 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Shisa4Q8CA71 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC18.67■□□□□ 0.58
Shisa4Q8CA71 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC18.67■□□□□ 0.58
Shisa4Q8CA71 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Shisa4Q8CA71 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
Shisa4Q8CA71 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC18.67■□□□□ 0.58
Shisa4Q8CA71 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Shisa4Q8CA71 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC18.67■□□□□ 0.58
Shisa4Q8CA71 Gm18733-201ENSMUST00000173950 856 ntBASIC18.67■□□□□ 0.58
Shisa4Q8CA71 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Shisa4Q8CA71 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC18.67■□□□□ 0.58
Shisa4Q8CA71 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC18.67■□□□□ 0.58
Shisa4Q8CA71 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC18.67■□□□□ 0.58
Shisa4Q8CA71 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC18.67■□□□□ 0.58
Shisa4Q8CA71 Gm6296-201ENSMUST00000222599 943 ntBASIC18.67■□□□□ 0.58
Shisa4Q8CA71 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Shisa4Q8CA71 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC18.67■□□□□ 0.58
Shisa4Q8CA71 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Shisa4Q8CA71 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Shisa4Q8CA71 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Shisa4Q8CA71 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Shisa4Q8CA71 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Shisa4Q8CA71 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Shisa4Q8CA71 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Shisa4Q8CA71 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Shisa4Q8CA71 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC18.66■□□□□ 0.58
Shisa4Q8CA71 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Shisa4Q8CA71 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Shisa4Q8CA71 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Shisa4Q8CA71 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Shisa4Q8CA71 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Shisa4Q8CA71 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Shisa4Q8CA71 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Shisa4Q8CA71 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Shisa4Q8CA71 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Shisa4Q8CA71 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Shisa4Q8CA71 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Shisa4Q8CA71 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Shisa4Q8CA71 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Shisa4Q8CA71 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Shisa4Q8CA71 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Shisa4Q8CA71 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Shisa4Q8CA71 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Shisa4Q8CA71 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Shisa4Q8CA71 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC18.65■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms