Protein–RNA interactions for Protein: Q8C6S9

Cfap54, Cilia- and flagella-associated protein 54, mousemouse

Predictions only

Length 3,106 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap54Q8C6S9 Gm45747-201ENSMUST00000212203 999 ntBASIC15.37■□□□□ 0.05
Cfap54Q8C6S9 AC114585.2-202ENSMUST00000228094 426 ntBASIC15.37■□□□□ 0.05
Cfap54Q8C6S9 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC15.37■□□□□ 0.05
Cfap54Q8C6S9 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cfap54Q8C6S9 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC15.37■□□□□ 0.05
Cfap54Q8C6S9 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cfap54Q8C6S9 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cfap54Q8C6S9 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Cfap54Q8C6S9 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Cfap54Q8C6S9 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
Cfap54Q8C6S9 Gm13365-201ENSMUST00000121188 973 ntBASIC15.37■□□□□ 0.05
Cfap54Q8C6S9 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Cfap54Q8C6S9 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cfap54Q8C6S9 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Cfap54Q8C6S9 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cfap54Q8C6S9 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cfap54Q8C6S9 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cfap54Q8C6S9 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
Cfap54Q8C6S9 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Cfap54Q8C6S9 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC15.36■□□□□ 0.05
Cfap54Q8C6S9 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cfap54Q8C6S9 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cfap54Q8C6S9 Mir7023-201ENSMUST00000185093 64 ntBASIC15.36■□□□□ 0.05
Cfap54Q8C6S9 Gm5253-201ENSMUST00000187104 1025 ntBASIC15.36■□□□□ 0.05
Cfap54Q8C6S9 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC15.36■□□□□ 0.05
Cfap54Q8C6S9 AC131709.1-201ENSMUST00000224731 1180 ntBASIC15.36■□□□□ 0.05
Cfap54Q8C6S9 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Cfap54Q8C6S9 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Cfap54Q8C6S9 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Cfap54Q8C6S9 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cfap54Q8C6S9 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC15.36■□□□□ 0.05
Cfap54Q8C6S9 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cfap54Q8C6S9 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cfap54Q8C6S9 Gm27301-201ENSMUST00000184012 127 ntBASIC15.36■□□□□ 0.05
Cfap54Q8C6S9 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Cfap54Q8C6S9 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC15.36■□□□□ 0.05
Cfap54Q8C6S9 Gm26596-201ENSMUST00000180464 2655 ntBASIC15.36■□□□□ 0.05
Cfap54Q8C6S9 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cfap54Q8C6S9 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cfap54Q8C6S9 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cfap54Q8C6S9 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cfap54Q8C6S9 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cfap54Q8C6S9 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cfap54Q8C6S9 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Cfap54Q8C6S9 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cfap54Q8C6S9 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC15.35■□□□□ 0.05
Cfap54Q8C6S9 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cfap54Q8C6S9 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cfap54Q8C6S9 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cfap54Q8C6S9 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cfap54Q8C6S9 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cfap54Q8C6S9 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cfap54Q8C6S9 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cfap54Q8C6S9 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC15.35■□□□□ 0.05
Cfap54Q8C6S9 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC15.35■□□□□ 0.05
Cfap54Q8C6S9 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Cfap54Q8C6S9 Gm2423-201ENSMUST00000074863 733 ntBASIC15.35■□□□□ 0.05
Cfap54Q8C6S9 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Cfap54Q8C6S9 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cfap54Q8C6S9 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cfap54Q8C6S9 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Cfap54Q8C6S9 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC15.35■□□□□ 0.05
Cfap54Q8C6S9 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Cfap54Q8C6S9 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Cfap54Q8C6S9 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Cfap54Q8C6S9 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC15.34■□□□□ 0.05
Cfap54Q8C6S9 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cfap54Q8C6S9 Hist1h2al-201ENSMUST00000091708 339 ntBASIC15.34■□□□□ 0.05
Cfap54Q8C6S9 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cfap54Q8C6S9 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cfap54Q8C6S9 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cfap54Q8C6S9 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cfap54Q8C6S9 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cfap54Q8C6S9 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC15.34■□□□□ 0.05
Cfap54Q8C6S9 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC15.34■□□□□ 0.05
Cfap54Q8C6S9 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Cfap54Q8C6S9 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cfap54Q8C6S9 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cfap54Q8C6S9 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cfap54Q8C6S9 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Cfap54Q8C6S9 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cfap54Q8C6S9 Best4-ps-201ENSMUST00000129783 1380 ntBASIC15.34■□□□□ 0.05
Cfap54Q8C6S9 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC15.34■□□□□ 0.05
Cfap54Q8C6S9 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC15.34■□□□□ 0.05
Cfap54Q8C6S9 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cfap54Q8C6S9 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cfap54Q8C6S9 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Cfap54Q8C6S9 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cfap54Q8C6S9 Gm20628-201ENSMUST00000177363 3215 ntBASIC15.34■□□□□ 0.05
Cfap54Q8C6S9 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Cfap54Q8C6S9 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Cfap54Q8C6S9 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Cfap54Q8C6S9 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
Cfap54Q8C6S9 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.05
Cfap54Q8C6S9 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Cfap54Q8C6S9 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC15.33■□□□□ 0.05
Cfap54Q8C6S9 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Cfap54Q8C6S9 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC15.33■□□□□ 0.05
Cfap54Q8C6S9 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cfap54Q8C6S9 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms