Protein–RNA interactions for Protein: Q8C5V8

Ccdc187, Coiled-coil domain-containing protein 187, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc187Q8C5V8 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC16.06■□□□□ 0.16
Ccdc187Q8C5V8 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC16.06■□□□□ 0.16
Ccdc187Q8C5V8 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ccdc187Q8C5V8 Gm2308-201ENSMUST00000166539 1004 ntBASIC16.06■□□□□ 0.16
Ccdc187Q8C5V8 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC16.06■□□□□ 0.16
Ccdc187Q8C5V8 CT943659.1-201ENSMUST00000215459 326 ntBASIC16.06■□□□□ 0.16
Ccdc187Q8C5V8 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ccdc187Q8C5V8 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Ccdc187Q8C5V8 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ccdc187Q8C5V8 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
Ccdc187Q8C5V8 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ccdc187Q8C5V8 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Ccdc187Q8C5V8 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ccdc187Q8C5V8 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Ccdc187Q8C5V8 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Ccdc187Q8C5V8 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ccdc187Q8C5V8 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Ccdc187Q8C5V8 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ccdc187Q8C5V8 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ccdc187Q8C5V8 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ccdc187Q8C5V8 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Ccdc187Q8C5V8 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ccdc187Q8C5V8 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC16.05■□□□□ 0.16
Ccdc187Q8C5V8 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC16.05■□□□□ 0.16
Ccdc187Q8C5V8 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC16.05■□□□□ 0.16
Ccdc187Q8C5V8 AC090659.1-201ENSMUST00000224334 768 ntBASIC16.05■□□□□ 0.16
Ccdc187Q8C5V8 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ccdc187Q8C5V8 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Ccdc187Q8C5V8 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ccdc187Q8C5V8 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Ccdc187Q8C5V8 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Ccdc187Q8C5V8 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ccdc187Q8C5V8 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Ccdc187Q8C5V8 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ccdc187Q8C5V8 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ccdc187Q8C5V8 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ccdc187Q8C5V8 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ccdc187Q8C5V8 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ccdc187Q8C5V8 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Ccdc187Q8C5V8 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ccdc187Q8C5V8 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ccdc187Q8C5V8 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Ccdc187Q8C5V8 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
Ccdc187Q8C5V8 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
Ccdc187Q8C5V8 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Ccdc187Q8C5V8 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC16.04■□□□□ 0.16
Ccdc187Q8C5V8 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ccdc187Q8C5V8 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Ccdc187Q8C5V8 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Ccdc187Q8C5V8 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ccdc187Q8C5V8 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC16.04■□□□□ 0.16
Ccdc187Q8C5V8 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ccdc187Q8C5V8 Gm8344-201ENSMUST00000119813 856 ntBASIC16.04■□□□□ 0.16
Ccdc187Q8C5V8 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Ccdc187Q8C5V8 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
Ccdc187Q8C5V8 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Ccdc187Q8C5V8 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Ccdc187Q8C5V8 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC16.04■□□□□ 0.16
Ccdc187Q8C5V8 Gm45683-201ENSMUST00000210825 1247 ntBASIC16.04■□□□□ 0.16
Ccdc187Q8C5V8 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ccdc187Q8C5V8 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC16.04■□□□□ 0.16
Ccdc187Q8C5V8 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ccdc187Q8C5V8 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC16.04■□□□□ 0.16
Ccdc187Q8C5V8 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ccdc187Q8C5V8 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ccdc187Q8C5V8 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Ccdc187Q8C5V8 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ccdc187Q8C5V8 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ccdc187Q8C5V8 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Ccdc187Q8C5V8 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC16.03■□□□□ 0.16
Ccdc187Q8C5V8 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ccdc187Q8C5V8 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ccdc187Q8C5V8 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ccdc187Q8C5V8 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ccdc187Q8C5V8 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Ccdc187Q8C5V8 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Ccdc187Q8C5V8 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Ccdc187Q8C5V8 Gm5898-201ENSMUST00000121016 2071 ntBASIC16.03■□□□□ 0.16
Ccdc187Q8C5V8 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ccdc187Q8C5V8 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC16.03■□□□□ 0.16
Ccdc187Q8C5V8 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ccdc187Q8C5V8 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Ccdc187Q8C5V8 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Ccdc187Q8C5V8 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC16.03■□□□□ 0.16
Ccdc187Q8C5V8 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Ccdc187Q8C5V8 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ccdc187Q8C5V8 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ccdc187Q8C5V8 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ccdc187Q8C5V8 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ccdc187Q8C5V8 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ccdc187Q8C5V8 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ccdc187Q8C5V8 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Ccdc187Q8C5V8 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ccdc187Q8C5V8 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Ccdc187Q8C5V8 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ccdc187Q8C5V8 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Ccdc187Q8C5V8 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ccdc187Q8C5V8 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ccdc187Q8C5V8 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC16.02■□□□□ 0.16
Ccdc187Q8C5V8 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC16.02■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms