Protein–RNA interactions for Protein: Q8C1Q6

Smim4, Small integral membrane protein 4, mousemouse

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim4Q8C1Q6 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Smim4Q8C1Q6 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Smim4Q8C1Q6 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Smim4Q8C1Q6 Gm27011-201ENSMUST00000182352 972 ntBASIC13.53□□□□□ -0.24
Smim4Q8C1Q6 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Smim4Q8C1Q6 AC159205.6-201ENSMUST00000224935 887 ntBASIC13.53□□□□□ -0.24
Smim4Q8C1Q6 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Smim4Q8C1Q6 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Smim4Q8C1Q6 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC13.53□□□□□ -0.24
Smim4Q8C1Q6 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Smim4Q8C1Q6 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Smim4Q8C1Q6 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Smim4Q8C1Q6 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
Smim4Q8C1Q6 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Smim4Q8C1Q6 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Smim4Q8C1Q6 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Smim4Q8C1Q6 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Smim4Q8C1Q6 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Smim4Q8C1Q6 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Smim4Q8C1Q6 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Smim4Q8C1Q6 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Smim4Q8C1Q6 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Smim4Q8C1Q6 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Smim4Q8C1Q6 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Smim4Q8C1Q6 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Smim4Q8C1Q6 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Smim4Q8C1Q6 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Smim4Q8C1Q6 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Smim4Q8C1Q6 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Smim4Q8C1Q6 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Smim4Q8C1Q6 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Smim4Q8C1Q6 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Smim4Q8C1Q6 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Smim4Q8C1Q6 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Smim4Q8C1Q6 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Smim4Q8C1Q6 Gm11336-201ENSMUST00000118168 334 ntBASIC13.52□□□□□ -0.25
Smim4Q8C1Q6 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC13.52□□□□□ -0.25
Smim4Q8C1Q6 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC13.52□□□□□ -0.25
Smim4Q8C1Q6 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Smim4Q8C1Q6 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC13.52□□□□□ -0.25
Smim4Q8C1Q6 Gm29707-201ENSMUST00000196325 491 ntBASIC13.52□□□□□ -0.25
Smim4Q8C1Q6 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Smim4Q8C1Q6 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Smim4Q8C1Q6 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Smim4Q8C1Q6 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Smim4Q8C1Q6 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Smim4Q8C1Q6 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Smim4Q8C1Q6 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Smim4Q8C1Q6 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC13.52□□□□□ -0.25
Smim4Q8C1Q6 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC13.52□□□□□ -0.25
Smim4Q8C1Q6 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Smim4Q8C1Q6 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Smim4Q8C1Q6 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Smim4Q8C1Q6 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Smim4Q8C1Q6 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Smim4Q8C1Q6 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Smim4Q8C1Q6 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Smim4Q8C1Q6 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Smim4Q8C1Q6 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Smim4Q8C1Q6 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Smim4Q8C1Q6 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Smim4Q8C1Q6 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Smim4Q8C1Q6 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Smim4Q8C1Q6 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Smim4Q8C1Q6 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Smim4Q8C1Q6 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Smim4Q8C1Q6 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Smim4Q8C1Q6 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Smim4Q8C1Q6 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC13.51□□□□□ -0.25
Smim4Q8C1Q6 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Smim4Q8C1Q6 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Smim4Q8C1Q6 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Smim4Q8C1Q6 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Smim4Q8C1Q6 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Smim4Q8C1Q6 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC13.51□□□□□ -0.25
Smim4Q8C1Q6 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Smim4Q8C1Q6 Gm37055-201ENSMUST00000191866 133 ntBASIC13.51□□□□□ -0.25
Smim4Q8C1Q6 Gm29994-201ENSMUST00000195495 1193 ntBASIC13.51□□□□□ -0.25
Smim4Q8C1Q6 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC13.51□□□□□ -0.25
Smim4Q8C1Q6 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Smim4Q8C1Q6 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Smim4Q8C1Q6 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Smim4Q8C1Q6 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Smim4Q8C1Q6 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Smim4Q8C1Q6 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Smim4Q8C1Q6 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Smim4Q8C1Q6 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Smim4Q8C1Q6 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC13.51□□□□□ -0.25
Smim4Q8C1Q6 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Smim4Q8C1Q6 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Smim4Q8C1Q6 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Smim4Q8C1Q6 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Smim4Q8C1Q6 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Smim4Q8C1Q6 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Smim4Q8C1Q6 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC13.5□□□□□ -0.25
Smim4Q8C1Q6 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Smim4Q8C1Q6 Gm14464-201ENSMUST00000119658 1254 ntBASIC13.5□□□□□ -0.25
Smim4Q8C1Q6 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Smim4Q8C1Q6 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC13.5□□□□□ -0.25
Smim4Q8C1Q6 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms