Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trub1Q8C0D0 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Trub1Q8C0D0 Ntrk2-205ENSMUST00000224402 2284 ntBASIC16.66■□□□□ 0.26
Trub1Q8C0D0 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trub1Q8C0D0 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trub1Q8C0D0 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC16.66■□□□□ 0.26
Trub1Q8C0D0 Rbfox2-206ENSMUST00000227314 1810 ntBASIC16.66■□□□□ 0.26
Trub1Q8C0D0 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trub1Q8C0D0 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trub1Q8C0D0 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trub1Q8C0D0 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trub1Q8C0D0 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trub1Q8C0D0 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trub1Q8C0D0 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trub1Q8C0D0 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trub1Q8C0D0 Gm45328-201ENSMUST00000210942 917 ntBASIC16.65■□□□□ 0.26
Trub1Q8C0D0 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trub1Q8C0D0 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trub1Q8C0D0 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC16.65■□□□□ 0.26
Trub1Q8C0D0 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trub1Q8C0D0 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trub1Q8C0D0 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trub1Q8C0D0 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trub1Q8C0D0 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trub1Q8C0D0 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trub1Q8C0D0 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trub1Q8C0D0 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
Trub1Q8C0D0 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trub1Q8C0D0 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Trub1Q8C0D0 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trub1Q8C0D0 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC16.64■□□□□ 0.25
Trub1Q8C0D0 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trub1Q8C0D0 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Trub1Q8C0D0 AC158538.1-201ENSMUST00000225870 294 ntBASIC16.64■□□□□ 0.25
Trub1Q8C0D0 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Trub1Q8C0D0 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trub1Q8C0D0 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trub1Q8C0D0 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC16.64■□□□□ 0.25
Trub1Q8C0D0 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trub1Q8C0D0 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trub1Q8C0D0 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Trub1Q8C0D0 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC16.64■□□□□ 0.25
Trub1Q8C0D0 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trub1Q8C0D0 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trub1Q8C0D0 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trub1Q8C0D0 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC16.63■□□□□ 0.25
Trub1Q8C0D0 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trub1Q8C0D0 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trub1Q8C0D0 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
Trub1Q8C0D0 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trub1Q8C0D0 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trub1Q8C0D0 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC16.63■□□□□ 0.25
Trub1Q8C0D0 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC16.63■□□□□ 0.25
Trub1Q8C0D0 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trub1Q8C0D0 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trub1Q8C0D0 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trub1Q8C0D0 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trub1Q8C0D0 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trub1Q8C0D0 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC16.63■□□□□ 0.25
Trub1Q8C0D0 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trub1Q8C0D0 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trub1Q8C0D0 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trub1Q8C0D0 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trub1Q8C0D0 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trub1Q8C0D0 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trub1Q8C0D0 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trub1Q8C0D0 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trub1Q8C0D0 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trub1Q8C0D0 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trub1Q8C0D0 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trub1Q8C0D0 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trub1Q8C0D0 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trub1Q8C0D0 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trub1Q8C0D0 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trub1Q8C0D0 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trub1Q8C0D0 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Trub1Q8C0D0 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trub1Q8C0D0 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trub1Q8C0D0 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trub1Q8C0D0 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trub1Q8C0D0 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Trub1Q8C0D0 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trub1Q8C0D0 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trub1Q8C0D0 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Trub1Q8C0D0 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Trub1Q8C0D0 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trub1Q8C0D0 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Trub1Q8C0D0 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Trub1Q8C0D0 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Trub1Q8C0D0 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Trub1Q8C0D0 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trub1Q8C0D0 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC16.62■□□□□ 0.25
Trub1Q8C0D0 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trub1Q8C0D0 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trub1Q8C0D0 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trub1Q8C0D0 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trub1Q8C0D0 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trub1Q8C0D0 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trub1Q8C0D0 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trub1Q8C0D0 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms