Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sh3rf2Q8BZT2 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sh3rf2Q8BZT2 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sh3rf2Q8BZT2 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sh3rf2Q8BZT2 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sh3rf2Q8BZT2 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sh3rf2Q8BZT2 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sh3rf2Q8BZT2 Gm1401-201ENSMUST00000122048 772 ntBASIC16.31■□□□□ 0.2
Sh3rf2Q8BZT2 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC16.31■□□□□ 0.2
Sh3rf2Q8BZT2 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Sh3rf2Q8BZT2 Gm7230-201ENSMUST00000173026 815 ntBASIC16.31■□□□□ 0.2
Sh3rf2Q8BZT2 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Sh3rf2Q8BZT2 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sh3rf2Q8BZT2 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Sh3rf2Q8BZT2 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sh3rf2Q8BZT2 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sh3rf2Q8BZT2 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sh3rf2Q8BZT2 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sh3rf2Q8BZT2 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sh3rf2Q8BZT2 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sh3rf2Q8BZT2 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sh3rf2Q8BZT2 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Sh3rf2Q8BZT2 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sh3rf2Q8BZT2 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Sh3rf2Q8BZT2 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Sh3rf2Q8BZT2 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Sh3rf2Q8BZT2 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sh3rf2Q8BZT2 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sh3rf2Q8BZT2 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sh3rf2Q8BZT2 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Sh3rf2Q8BZT2 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sh3rf2Q8BZT2 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Sh3rf2Q8BZT2 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sh3rf2Q8BZT2 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sh3rf2Q8BZT2 Gm5837-201ENSMUST00000191844 1369 ntBASIC16.3■□□□□ 0.2
Sh3rf2Q8BZT2 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Sh3rf2Q8BZT2 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sh3rf2Q8BZT2 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Sh3rf2Q8BZT2 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sh3rf2Q8BZT2 Gm11780-201ENSMUST00000136880 516 ntBASIC16.3■□□□□ 0.2
Sh3rf2Q8BZT2 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC16.3■□□□□ 0.2
Sh3rf2Q8BZT2 Mir5126-201ENSMUST00000175513 77 ntBASIC16.3■□□□□ 0.2
Sh3rf2Q8BZT2 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Sh3rf2Q8BZT2 Gm27525-201ENSMUST00000184465 107 ntBASIC16.3■□□□□ 0.2
Sh3rf2Q8BZT2 AC154757.1-201ENSMUST00000228289 336 ntBASIC16.3■□□□□ 0.2
Sh3rf2Q8BZT2 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sh3rf2Q8BZT2 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sh3rf2Q8BZT2 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Sh3rf2Q8BZT2 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sh3rf2Q8BZT2 Ddx41-204ENSMUST00000224765 2199 ntBASIC16.3■□□□□ 0.2
Sh3rf2Q8BZT2 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sh3rf2Q8BZT2 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sh3rf2Q8BZT2 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sh3rf2Q8BZT2 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sh3rf2Q8BZT2 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sh3rf2Q8BZT2 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sh3rf2Q8BZT2 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sh3rf2Q8BZT2 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC16.29■□□□□ 0.2
Sh3rf2Q8BZT2 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sh3rf2Q8BZT2 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC16.29■□□□□ 0.2
Sh3rf2Q8BZT2 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Sh3rf2Q8BZT2 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC16.29■□□□□ 0.2
Sh3rf2Q8BZT2 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC16.29■□□□□ 0.2
Sh3rf2Q8BZT2 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Sh3rf2Q8BZT2 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Sh3rf2Q8BZT2 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sh3rf2Q8BZT2 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sh3rf2Q8BZT2 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sh3rf2Q8BZT2 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sh3rf2Q8BZT2 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sh3rf2Q8BZT2 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Sh3rf2Q8BZT2 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sh3rf2Q8BZT2 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Sh3rf2Q8BZT2 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Sh3rf2Q8BZT2 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sh3rf2Q8BZT2 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sh3rf2Q8BZT2 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sh3rf2Q8BZT2 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Sh3rf2Q8BZT2 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Sh3rf2Q8BZT2 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sh3rf2Q8BZT2 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sh3rf2Q8BZT2 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Sh3rf2Q8BZT2 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Sh3rf2Q8BZT2 Gm6089-201ENSMUST00000197666 938 ntBASIC16.28■□□□□ 0.2
Sh3rf2Q8BZT2 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Sh3rf2Q8BZT2 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC16.28■□□□□ 0.2
Sh3rf2Q8BZT2 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC16.28■□□□□ 0.2
Sh3rf2Q8BZT2 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Sh3rf2Q8BZT2 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sh3rf2Q8BZT2 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sh3rf2Q8BZT2 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Sh3rf2Q8BZT2 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sh3rf2Q8BZT2 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Sh3rf2Q8BZT2 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Sh3rf2Q8BZT2 Gm15743-202ENSMUST00000182690 1901 ntBASIC16.27■□□□□ 0.2
Sh3rf2Q8BZT2 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sh3rf2Q8BZT2 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Sh3rf2Q8BZT2 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sh3rf2Q8BZT2 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Sh3rf2Q8BZT2 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms