Protein–RNA interactions for Protein: Q8BUP8

Fam43a, Protein FAM43A, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam43aQ8BUP8 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Fam43aQ8BUP8 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Fam43aQ8BUP8 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Fam43aQ8BUP8 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Fam43aQ8BUP8 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Fam43aQ8BUP8 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Fam43aQ8BUP8 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Fam43aQ8BUP8 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC18.02■□□□□ 0.48
Fam43aQ8BUP8 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Fam43aQ8BUP8 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Fam43aQ8BUP8 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC18.02■□□□□ 0.48
Fam43aQ8BUP8 Gm16401-202ENSMUST00000197463 2074 ntBASIC18.02■□□□□ 0.48
Fam43aQ8BUP8 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Fam43aQ8BUP8 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Fam43aQ8BUP8 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Fam43aQ8BUP8 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
Fam43aQ8BUP8 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Fam43aQ8BUP8 Gm7791-201ENSMUST00000219066 539 ntBASIC18.02■□□□□ 0.48
Fam43aQ8BUP8 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC18.02■□□□□ 0.48
Fam43aQ8BUP8 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Fam43aQ8BUP8 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Fam43aQ8BUP8 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Fam43aQ8BUP8 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Fam43aQ8BUP8 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Fam43aQ8BUP8 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC18.02■□□□□ 0.47
Fam43aQ8BUP8 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Fam43aQ8BUP8 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Fam43aQ8BUP8 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Fam43aQ8BUP8 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
Fam43aQ8BUP8 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Fam43aQ8BUP8 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Fam43aQ8BUP8 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Fam43aQ8BUP8 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC18.01■□□□□ 0.47
Fam43aQ8BUP8 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Fam43aQ8BUP8 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC18.01■□□□□ 0.47
Fam43aQ8BUP8 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Fam43aQ8BUP8 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Fam43aQ8BUP8 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Fam43aQ8BUP8 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Fam43aQ8BUP8 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Fam43aQ8BUP8 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Fam43aQ8BUP8 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC18.01■□□□□ 0.47
Fam43aQ8BUP8 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Fam43aQ8BUP8 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
Fam43aQ8BUP8 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC18.01■□□□□ 0.47
Fam43aQ8BUP8 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Fam43aQ8BUP8 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Fam43aQ8BUP8 Gm45760-201ENSMUST00000212190 1782 ntBASIC18.01■□□□□ 0.47
Fam43aQ8BUP8 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC18.01■□□□□ 0.47
Fam43aQ8BUP8 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Fam43aQ8BUP8 AC093043.3-201ENSMUST00000226531 2273 ntBASIC18.01■□□□□ 0.47
Fam43aQ8BUP8 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Fam43aQ8BUP8 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Fam43aQ8BUP8 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Fam43aQ8BUP8 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC18.01■□□□□ 0.47
Fam43aQ8BUP8 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Fam43aQ8BUP8 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Fam43aQ8BUP8 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Fam43aQ8BUP8 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Fam43aQ8BUP8 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC18■□□□□ 0.47
Fam43aQ8BUP8 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC18■□□□□ 0.47
Fam43aQ8BUP8 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Fam43aQ8BUP8 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Fam43aQ8BUP8 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC18■□□□□ 0.47
Fam43aQ8BUP8 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC18■□□□□ 0.47
Fam43aQ8BUP8 Gm11539-201ENSMUST00000119837 557 ntBASIC18■□□□□ 0.47
Fam43aQ8BUP8 Gm13436-201ENSMUST00000120418 567 ntBASIC18■□□□□ 0.47
Fam43aQ8BUP8 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
Fam43aQ8BUP8 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC18■□□□□ 0.47
Fam43aQ8BUP8 Gm4217-201ENSMUST00000182243 1002 ntBASIC18■□□□□ 0.47
Fam43aQ8BUP8 Gm37025-201ENSMUST00000195159 829 ntBASIC18■□□□□ 0.47
Fam43aQ8BUP8 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC18■□□□□ 0.47
Fam43aQ8BUP8 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC18■□□□□ 0.47
Fam43aQ8BUP8 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Fam43aQ8BUP8 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Fam43aQ8BUP8 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Fam43aQ8BUP8 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC18■□□□□ 0.47
Fam43aQ8BUP8 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC18■□□□□ 0.47
Fam43aQ8BUP8 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC18■□□□□ 0.47
Fam43aQ8BUP8 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Fam43aQ8BUP8 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Fam43aQ8BUP8 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Fam43aQ8BUP8 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC18■□□□□ 0.47
Fam43aQ8BUP8 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Fam43aQ8BUP8 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Fam43aQ8BUP8 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Fam43aQ8BUP8 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
Fam43aQ8BUP8 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Fam43aQ8BUP8 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Fam43aQ8BUP8 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC17.99■□□□□ 0.47
Fam43aQ8BUP8 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Fam43aQ8BUP8 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Fam43aQ8BUP8 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC17.99■□□□□ 0.47
Fam43aQ8BUP8 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC17.99■□□□□ 0.47
Fam43aQ8BUP8 Gm43353-201ENSMUST00000199224 1295 ntBASIC17.99■□□□□ 0.47
Fam43aQ8BUP8 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC17.99■□□□□ 0.47
Fam43aQ8BUP8 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Fam43aQ8BUP8 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Fam43aQ8BUP8 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Fam43aQ8BUP8 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms