Protein–RNA interactions for Protein: Q8BTW8

Cdk5rap1, CDK5 regulatory subunit-associated protein 1, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap1Q8BTW8 Gm44390-201ENSMUST00000197533 144 ntBASIC15.28■□□□□ 0.04
Cdk5rap1Q8BTW8 Gm44313-201ENSMUST00000198018 138 ntBASIC15.28■□□□□ 0.04
Cdk5rap1Q8BTW8 Gm44486-201ENSMUST00000198508 138 ntBASIC15.28■□□□□ 0.04
Cdk5rap1Q8BTW8 Gm44314-201ENSMUST00000199263 138 ntBASIC15.28■□□□□ 0.04
Cdk5rap1Q8BTW8 Gm44394-201ENSMUST00000199558 138 ntBASIC15.28■□□□□ 0.04
Cdk5rap1Q8BTW8 Gm44484-201ENSMUST00000199873 138 ntBASIC15.28■□□□□ 0.04
Cdk5rap1Q8BTW8 Gm44466-201ENSMUST00000200264 138 ntBASIC15.28■□□□□ 0.04
Cdk5rap1Q8BTW8 Gm44359-201ENSMUST00000200671 138 ntBASIC15.28■□□□□ 0.04
Cdk5rap1Q8BTW8 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC15.28■□□□□ 0.04
Cdk5rap1Q8BTW8 Gm9172-201ENSMUST00000212092 954 ntBASIC15.28■□□□□ 0.04
Cdk5rap1Q8BTW8 AC161829.1-201ENSMUST00000220298 281 ntBASIC15.28■□□□□ 0.04
Cdk5rap1Q8BTW8 Rbfox2-207ENSMUST00000227533 1041 ntBASIC15.28■□□□□ 0.04
Cdk5rap1Q8BTW8 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cdk5rap1Q8BTW8 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Cdk5rap1Q8BTW8 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cdk5rap1Q8BTW8 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Cdk5rap1Q8BTW8 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Cdk5rap1Q8BTW8 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cdk5rap1Q8BTW8 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cdk5rap1Q8BTW8 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cdk5rap1Q8BTW8 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cdk5rap1Q8BTW8 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Cdk5rap1Q8BTW8 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cdk5rap1Q8BTW8 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cdk5rap1Q8BTW8 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cdk5rap1Q8BTW8 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cdk5rap1Q8BTW8 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.04
Cdk5rap1Q8BTW8 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Cdk5rap1Q8BTW8 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC15.27■□□□□ 0.04
Cdk5rap1Q8BTW8 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Cdk5rap1Q8BTW8 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC15.27■□□□□ 0.04
Cdk5rap1Q8BTW8 Gm6296-201ENSMUST00000222599 943 ntBASIC15.27■□□□□ 0.04
Cdk5rap1Q8BTW8 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cdk5rap1Q8BTW8 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cdk5rap1Q8BTW8 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.03
Cdk5rap1Q8BTW8 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cdk5rap1Q8BTW8 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
Cdk5rap1Q8BTW8 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Cdk5rap1Q8BTW8 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
Cdk5rap1Q8BTW8 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cdk5rap1Q8BTW8 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Cdk5rap1Q8BTW8 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdk5rap1Q8BTW8 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdk5rap1Q8BTW8 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdk5rap1Q8BTW8 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Cdk5rap1Q8BTW8 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdk5rap1Q8BTW8 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC15.26■□□□□ 0.03
Cdk5rap1Q8BTW8 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC15.26■□□□□ 0.03
Cdk5rap1Q8BTW8 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Cdk5rap1Q8BTW8 Gm7506-201ENSMUST00000207758 815 ntBASIC15.26■□□□□ 0.03
Cdk5rap1Q8BTW8 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdk5rap1Q8BTW8 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdk5rap1Q8BTW8 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Cdk5rap1Q8BTW8 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdk5rap1Q8BTW8 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdk5rap1Q8BTW8 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdk5rap1Q8BTW8 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC15.26■□□□□ 0.03
Cdk5rap1Q8BTW8 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Cdk5rap1Q8BTW8 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Cdk5rap1Q8BTW8 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC15.25■□□□□ 0.03
Cdk5rap1Q8BTW8 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdk5rap1Q8BTW8 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdk5rap1Q8BTW8 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdk5rap1Q8BTW8 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdk5rap1Q8BTW8 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC15.25■□□□□ 0.03
Cdk5rap1Q8BTW8 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdk5rap1Q8BTW8 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Cdk5rap1Q8BTW8 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Cdk5rap1Q8BTW8 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Cdk5rap1Q8BTW8 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdk5rap1Q8BTW8 Mir6404-201ENSMUST00000183699 94 ntBASIC15.25■□□□□ 0.03
Cdk5rap1Q8BTW8 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC15.25■□□□□ 0.03
Cdk5rap1Q8BTW8 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC15.25■□□□□ 0.03
Cdk5rap1Q8BTW8 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdk5rap1Q8BTW8 Vti1a-206ENSMUST00000225529 1244 ntBASIC15.25■□□□□ 0.03
Cdk5rap1Q8BTW8 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdk5rap1Q8BTW8 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Cdk5rap1Q8BTW8 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC15.25■□□□□ 0.03
Cdk5rap1Q8BTW8 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdk5rap1Q8BTW8 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdk5rap1Q8BTW8 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdk5rap1Q8BTW8 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdk5rap1Q8BTW8 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
Cdk5rap1Q8BTW8 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdk5rap1Q8BTW8 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdk5rap1Q8BTW8 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdk5rap1Q8BTW8 Gm15743-202ENSMUST00000182690 1901 ntBASIC15.25■□□□□ 0.03
Cdk5rap1Q8BTW8 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
Cdk5rap1Q8BTW8 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdk5rap1Q8BTW8 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Cdk5rap1Q8BTW8 Gm18856-201ENSMUST00000178096 1374 ntBASIC15.24■□□□□ 0.03
Cdk5rap1Q8BTW8 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Cdk5rap1Q8BTW8 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdk5rap1Q8BTW8 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Cdk5rap1Q8BTW8 Gm45774-201ENSMUST00000211992 2665 ntBASIC15.24■□□□□ 0.03
Cdk5rap1Q8BTW8 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdk5rap1Q8BTW8 Gm13216-201ENSMUST00000117145 591 ntBASIC15.24■□□□□ 0.03
Cdk5rap1Q8BTW8 Gm7862-201ENSMUST00000121461 292 ntBASIC15.24■□□□□ 0.03
Cdk5rap1Q8BTW8 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdk5rap1Q8BTW8 Gm18733-201ENSMUST00000173950 856 ntBASIC15.24■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 67.7 ms