Protein–RNA interactions for Protein: Q8BRE0

Rd3, Protein RD3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rd3Q8BRE0 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rd3Q8BRE0 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Rd3Q8BRE0 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Rd3Q8BRE0 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rd3Q8BRE0 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC17.08■□□□□ 0.32
Rd3Q8BRE0 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC17.08■□□□□ 0.32
Rd3Q8BRE0 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC17.08■□□□□ 0.32
Rd3Q8BRE0 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC17.08■□□□□ 0.32
Rd3Q8BRE0 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rd3Q8BRE0 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC17.08■□□□□ 0.32
Rd3Q8BRE0 Gm8349-201ENSMUST00000182720 1003 ntBASIC17.08■□□□□ 0.32
Rd3Q8BRE0 Gm6089-201ENSMUST00000197666 938 ntBASIC17.08■□□□□ 0.32
Rd3Q8BRE0 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rd3Q8BRE0 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC17.08■□□□□ 0.32
Rd3Q8BRE0 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rd3Q8BRE0 AC159093.1-201ENSMUST00000227779 380 ntBASIC17.08■□□□□ 0.32
Rd3Q8BRE0 AC154757.1-201ENSMUST00000228289 336 ntBASIC17.08■□□□□ 0.32
Rd3Q8BRE0 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rd3Q8BRE0 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rd3Q8BRE0 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rd3Q8BRE0 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Rd3Q8BRE0 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Rd3Q8BRE0 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Rd3Q8BRE0 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC17.08■□□□□ 0.32
Rd3Q8BRE0 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC17.08■□□□□ 0.32
Rd3Q8BRE0 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rd3Q8BRE0 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Rd3Q8BRE0 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rd3Q8BRE0 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rd3Q8BRE0 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rd3Q8BRE0 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rd3Q8BRE0 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rd3Q8BRE0 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rd3Q8BRE0 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rd3Q8BRE0 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC17.07■□□□□ 0.32
Rd3Q8BRE0 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Rd3Q8BRE0 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rd3Q8BRE0 Gm37500-201ENSMUST00000192059 1443 ntBASIC17.07■□□□□ 0.32
Rd3Q8BRE0 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Rd3Q8BRE0 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rd3Q8BRE0 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rd3Q8BRE0 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rd3Q8BRE0 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rd3Q8BRE0 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Rd3Q8BRE0 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rd3Q8BRE0 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rd3Q8BRE0 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Rd3Q8BRE0 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Rd3Q8BRE0 Gm12260-201ENSMUST00000122447 411 ntBASIC17.07■□□□□ 0.32
Rd3Q8BRE0 Gm25925-201ENSMUST00000158314 306 ntBASIC17.07■□□□□ 0.32
Rd3Q8BRE0 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rd3Q8BRE0 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC17.07■□□□□ 0.32
Rd3Q8BRE0 Gm5264-201ENSMUST00000190584 848 ntBASIC17.07■□□□□ 0.32
Rd3Q8BRE0 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Rd3Q8BRE0 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Rd3Q8BRE0 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC17.07■□□□□ 0.32
Rd3Q8BRE0 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rd3Q8BRE0 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rd3Q8BRE0 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rd3Q8BRE0 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Rd3Q8BRE0 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Rd3Q8BRE0 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Rd3Q8BRE0 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Rd3Q8BRE0 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rd3Q8BRE0 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rd3Q8BRE0 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rd3Q8BRE0 Gm43702-201ENSMUST00000198772 2546 ntBASIC17.07■□□□□ 0.32
Rd3Q8BRE0 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rd3Q8BRE0 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rd3Q8BRE0 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rd3Q8BRE0 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rd3Q8BRE0 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rd3Q8BRE0 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Rd3Q8BRE0 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC17.06■□□□□ 0.32
Rd3Q8BRE0 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rd3Q8BRE0 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rd3Q8BRE0 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC17.06■□□□□ 0.32
Rd3Q8BRE0 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Rd3Q8BRE0 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rd3Q8BRE0 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rd3Q8BRE0 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rd3Q8BRE0 Gm11779-201ENSMUST00000118541 368 ntBASIC17.06■□□□□ 0.32
Rd3Q8BRE0 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC17.06■□□□□ 0.32
Rd3Q8BRE0 Gm6550-201ENSMUST00000187574 993 ntBASIC17.06■□□□□ 0.32
Rd3Q8BRE0 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC17.06■□□□□ 0.32
Rd3Q8BRE0 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC17.06■□□□□ 0.32
Rd3Q8BRE0 Psmb5-202ENSMUST00000227257 622 ntBASIC17.06■□□□□ 0.32
Rd3Q8BRE0 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rd3Q8BRE0 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rd3Q8BRE0 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rd3Q8BRE0 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rd3Q8BRE0 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rd3Q8BRE0 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
Rd3Q8BRE0 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rd3Q8BRE0 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC17.06■□□□□ 0.32
Rd3Q8BRE0 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rd3Q8BRE0 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Rd3Q8BRE0 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rd3Q8BRE0 Gm45606-201ENSMUST00000209836 2795 ntBASIC17.05■□□□□ 0.32
Rd3Q8BRE0 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC17.05■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms