Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Col16a1Q8BLX7 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Col16a1Q8BLX7 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Col16a1Q8BLX7 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Col16a1Q8BLX7 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC21.04■□□□□ 0.96
Col16a1Q8BLX7 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Col16a1Q8BLX7 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC21.03■□□□□ 0.96
Col16a1Q8BLX7 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Col16a1Q8BLX7 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Col16a1Q8BLX7 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Col16a1Q8BLX7 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC21.03■□□□□ 0.96
Col16a1Q8BLX7 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC21.03■□□□□ 0.96
Col16a1Q8BLX7 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC21.03■□□□□ 0.96
Col16a1Q8BLX7 Gm5898-201ENSMUST00000121016 2071 ntBASIC21.03■□□□□ 0.96
Col16a1Q8BLX7 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Col16a1Q8BLX7 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Col16a1Q8BLX7 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Col16a1Q8BLX7 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Col16a1Q8BLX7 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Col16a1Q8BLX7 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Col16a1Q8BLX7 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Col16a1Q8BLX7 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC21.03■□□□□ 0.96
Col16a1Q8BLX7 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Col16a1Q8BLX7 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Col16a1Q8BLX7 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Col16a1Q8BLX7 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Col16a1Q8BLX7 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC21.02■□□□□ 0.96
Col16a1Q8BLX7 AC127302.2-201ENSMUST00000215212 268 ntBASIC21.02■□□□□ 0.96
Col16a1Q8BLX7 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Col16a1Q8BLX7 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Col16a1Q8BLX7 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Col16a1Q8BLX7 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Col16a1Q8BLX7 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Col16a1Q8BLX7 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Col16a1Q8BLX7 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
Col16a1Q8BLX7 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC21.02■□□□□ 0.96
Col16a1Q8BLX7 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.95
Col16a1Q8BLX7 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Col16a1Q8BLX7 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
Col16a1Q8BLX7 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Col16a1Q8BLX7 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC21.02■□□□□ 0.95
Col16a1Q8BLX7 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC21.02■□□□□ 0.95
Col16a1Q8BLX7 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC21.02■□□□□ 0.95
Col16a1Q8BLX7 Gm19164-201ENSMUST00000210667 640 ntBASIC21.02■□□□□ 0.95
Col16a1Q8BLX7 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Col16a1Q8BLX7 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC21.02■□□□□ 0.95
Col16a1Q8BLX7 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC21.01■□□□□ 0.95
Col16a1Q8BLX7 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Col16a1Q8BLX7 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Col16a1Q8BLX7 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Col16a1Q8BLX7 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Col16a1Q8BLX7 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Col16a1Q8BLX7 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Col16a1Q8BLX7 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC21.01■□□□□ 0.95
Col16a1Q8BLX7 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Col16a1Q8BLX7 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC21.01■□□□□ 0.95
Col16a1Q8BLX7 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Col16a1Q8BLX7 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC21.01■□□□□ 0.95
Col16a1Q8BLX7 Gm7787-201ENSMUST00000216858 688 ntBASIC21.01■□□□□ 0.95
Col16a1Q8BLX7 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC21.01■□□□□ 0.95
Col16a1Q8BLX7 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Col16a1Q8BLX7 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC21.01■□□□□ 0.95
Col16a1Q8BLX7 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Col16a1Q8BLX7 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Col16a1Q8BLX7 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
Col16a1Q8BLX7 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC21■□□□□ 0.95
Col16a1Q8BLX7 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Col16a1Q8BLX7 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Col16a1Q8BLX7 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Col16a1Q8BLX7 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC21■□□□□ 0.95
Col16a1Q8BLX7 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC21■□□□□ 0.95
Col16a1Q8BLX7 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Col16a1Q8BLX7 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Col16a1Q8BLX7 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC21■□□□□ 0.95
Col16a1Q8BLX7 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Col16a1Q8BLX7 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC21■□□□□ 0.95
Col16a1Q8BLX7 Mir7023-201ENSMUST00000185093 64 ntBASIC21■□□□□ 0.95
Col16a1Q8BLX7 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC21■□□□□ 0.95
Col16a1Q8BLX7 AC122024.2-201ENSMUST00000220086 871 ntBASIC21■□□□□ 0.95
Col16a1Q8BLX7 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Col16a1Q8BLX7 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC21■□□□□ 0.95
Col16a1Q8BLX7 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC21■□□□□ 0.95
Col16a1Q8BLX7 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Col16a1Q8BLX7 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Col16a1Q8BLX7 Nrn1-204ENSMUST00000224323 1779 ntBASIC21■□□□□ 0.95
Col16a1Q8BLX7 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Col16a1Q8BLX7 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Col16a1Q8BLX7 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Col16a1Q8BLX7 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Col16a1Q8BLX7 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Col16a1Q8BLX7 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC20.99■□□□□ 0.95
Col16a1Q8BLX7 Gm25948-201ENSMUST00000175334 112 ntBASIC20.99■□□□□ 0.95
Col16a1Q8BLX7 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Col16a1Q8BLX7 Gm20553-201ENSMUST00000204205 844 ntBASIC20.99■□□□□ 0.95
Col16a1Q8BLX7 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Col16a1Q8BLX7 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Col16a1Q8BLX7 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Col16a1Q8BLX7 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Col16a1Q8BLX7 Gm45606-201ENSMUST00000209836 2795 ntBASIC20.99■□□□□ 0.95
Col16a1Q8BLX7 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms