Protein–RNA interactions for Protein: Q8BLA8

Trpa1, Transient receptor potential cation channel subfamily A member 1, mousemouse

Predictions only

Length 1,125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trpa1Q8BLA8 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trpa1Q8BLA8 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Trpa1Q8BLA8 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Trpa1Q8BLA8 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trpa1Q8BLA8 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Trpa1Q8BLA8 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trpa1Q8BLA8 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trpa1Q8BLA8 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
Trpa1Q8BLA8 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trpa1Q8BLA8 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Trpa1Q8BLA8 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trpa1Q8BLA8 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trpa1Q8BLA8 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC16.97■□□□□ 0.31
Trpa1Q8BLA8 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC16.97■□□□□ 0.31
Trpa1Q8BLA8 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trpa1Q8BLA8 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trpa1Q8BLA8 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Trpa1Q8BLA8 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trpa1Q8BLA8 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trpa1Q8BLA8 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trpa1Q8BLA8 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trpa1Q8BLA8 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Trpa1Q8BLA8 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trpa1Q8BLA8 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC16.96■□□□□ 0.31
Trpa1Q8BLA8 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC16.96■□□□□ 0.31
Trpa1Q8BLA8 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Trpa1Q8BLA8 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Trpa1Q8BLA8 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Trpa1Q8BLA8 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trpa1Q8BLA8 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trpa1Q8BLA8 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trpa1Q8BLA8 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.31
Trpa1Q8BLA8 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trpa1Q8BLA8 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Trpa1Q8BLA8 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Trpa1Q8BLA8 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
Trpa1Q8BLA8 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
Trpa1Q8BLA8 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Trpa1Q8BLA8 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trpa1Q8BLA8 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trpa1Q8BLA8 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Trpa1Q8BLA8 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trpa1Q8BLA8 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trpa1Q8BLA8 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trpa1Q8BLA8 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Trpa1Q8BLA8 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trpa1Q8BLA8 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trpa1Q8BLA8 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trpa1Q8BLA8 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trpa1Q8BLA8 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trpa1Q8BLA8 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC16.95■□□□□ 0.3
Trpa1Q8BLA8 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Trpa1Q8BLA8 Gm15442-201ENSMUST00000117905 1527 ntBASIC16.95■□□□□ 0.3
Trpa1Q8BLA8 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Trpa1Q8BLA8 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC16.95■□□□□ 0.3
Trpa1Q8BLA8 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trpa1Q8BLA8 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trpa1Q8BLA8 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Trpa1Q8BLA8 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trpa1Q8BLA8 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Trpa1Q8BLA8 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trpa1Q8BLA8 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC16.94■□□□□ 0.3
Trpa1Q8BLA8 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Trpa1Q8BLA8 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Trpa1Q8BLA8 Ank2-226ENSMUST00000189368 339 ntBASIC16.94■□□□□ 0.3
Trpa1Q8BLA8 Gm45328-201ENSMUST00000210942 917 ntBASIC16.94■□□□□ 0.3
Trpa1Q8BLA8 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trpa1Q8BLA8 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trpa1Q8BLA8 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Trpa1Q8BLA8 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trpa1Q8BLA8 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Trpa1Q8BLA8 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trpa1Q8BLA8 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trpa1Q8BLA8 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trpa1Q8BLA8 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trpa1Q8BLA8 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trpa1Q8BLA8 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trpa1Q8BLA8 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trpa1Q8BLA8 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trpa1Q8BLA8 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Trpa1Q8BLA8 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trpa1Q8BLA8 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Trpa1Q8BLA8 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trpa1Q8BLA8 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trpa1Q8BLA8 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trpa1Q8BLA8 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trpa1Q8BLA8 Gm15794-201ENSMUST00000120182 631 ntBASIC16.93■□□□□ 0.3
Trpa1Q8BLA8 Olfr129-201ENSMUST00000122318 993 ntBASIC16.93■□□□□ 0.3
Trpa1Q8BLA8 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trpa1Q8BLA8 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC16.93■□□□□ 0.3
Trpa1Q8BLA8 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
Trpa1Q8BLA8 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
Trpa1Q8BLA8 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trpa1Q8BLA8 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trpa1Q8BLA8 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Trpa1Q8BLA8 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trpa1Q8BLA8 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trpa1Q8BLA8 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trpa1Q8BLA8 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Trpa1Q8BLA8 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms