Protein–RNA interactions for Protein: Q8BJL0

Smarcal1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcal1Q8BJL0 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smarcal1Q8BJL0 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smarcal1Q8BJL0 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smarcal1Q8BJL0 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Smarcal1Q8BJL0 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC17.12■□□□□ 0.33
Smarcal1Q8BJL0 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC17.12■□□□□ 0.33
Smarcal1Q8BJL0 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC17.12■□□□□ 0.33
Smarcal1Q8BJL0 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC17.12■□□□□ 0.33
Smarcal1Q8BJL0 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC17.12■□□□□ 0.33
Smarcal1Q8BJL0 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC17.12■□□□□ 0.33
Smarcal1Q8BJL0 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smarcal1Q8BJL0 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smarcal1Q8BJL0 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Smarcal1Q8BJL0 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smarcal1Q8BJL0 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smarcal1Q8BJL0 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smarcal1Q8BJL0 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smarcal1Q8BJL0 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC17.11■□□□□ 0.33
Smarcal1Q8BJL0 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Smarcal1Q8BJL0 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smarcal1Q8BJL0 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Smarcal1Q8BJL0 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smarcal1Q8BJL0 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smarcal1Q8BJL0 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smarcal1Q8BJL0 Gm4609-201ENSMUST00000106443 1002 ntBASIC17.11■□□□□ 0.33
Smarcal1Q8BJL0 Gm5138-201ENSMUST00000113842 1002 ntBASIC17.11■□□□□ 0.33
Smarcal1Q8BJL0 Gm15191-201ENSMUST00000117933 1000 ntBASIC17.11■□□□□ 0.33
Smarcal1Q8BJL0 Gm12182-201ENSMUST00000118655 1008 ntBASIC17.11■□□□□ 0.33
Smarcal1Q8BJL0 Gm13882-201ENSMUST00000120886 1002 ntBASIC17.11■□□□□ 0.33
Smarcal1Q8BJL0 Gm10284-201ENSMUST00000145057 1005 ntBASIC17.11■□□□□ 0.33
Smarcal1Q8BJL0 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC17.11■□□□□ 0.33
Smarcal1Q8BJL0 Gm10481-201ENSMUST00000179228 1002 ntBASIC17.11■□□□□ 0.33
Smarcal1Q8BJL0 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC17.11■□□□□ 0.33
Smarcal1Q8BJL0 Gm2574-201ENSMUST00000181051 1002 ntBASIC17.11■□□□□ 0.33
Smarcal1Q8BJL0 Gm3200-201ENSMUST00000181493 1002 ntBASIC17.11■□□□□ 0.33
Smarcal1Q8BJL0 Gm8825-201ENSMUST00000182565 998 ntBASIC17.11■□□□□ 0.33
Smarcal1Q8BJL0 Gm4518-201ENSMUST00000182638 718 ntBASIC17.11■□□□□ 0.33
Smarcal1Q8BJL0 Gm8330-201ENSMUST00000182754 1008 ntBASIC17.11■□□□□ 0.33
Smarcal1Q8BJL0 Gm4575-201ENSMUST00000182991 1002 ntBASIC17.11■□□□□ 0.33
Smarcal1Q8BJL0 Gm8709-201ENSMUST00000183230 1012 ntBASIC17.11■□□□□ 0.33
Smarcal1Q8BJL0 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Smarcal1Q8BJL0 AC159106.1-201ENSMUST00000224421 690 ntBASIC17.11■□□□□ 0.33
Smarcal1Q8BJL0 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smarcal1Q8BJL0 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smarcal1Q8BJL0 Gm10293-201ENSMUST00000076317 1002 ntBASIC17.11■□□□□ 0.33
Smarcal1Q8BJL0 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smarcal1Q8BJL0 Gm6316-201ENSMUST00000082064 1020 ntBASIC17.11■□□□□ 0.33
Smarcal1Q8BJL0 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Smarcal1Q8BJL0 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smarcal1Q8BJL0 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smarcal1Q8BJL0 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smarcal1Q8BJL0 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smarcal1Q8BJL0 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Smarcal1Q8BJL0 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smarcal1Q8BJL0 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Smarcal1Q8BJL0 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smarcal1Q8BJL0 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smarcal1Q8BJL0 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC17.11■□□□□ 0.33
Smarcal1Q8BJL0 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
Smarcal1Q8BJL0 Gm5898-201ENSMUST00000121016 2071 ntBASIC17.11■□□□□ 0.33
Smarcal1Q8BJL0 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smarcal1Q8BJL0 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smarcal1Q8BJL0 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Smarcal1Q8BJL0 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smarcal1Q8BJL0 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smarcal1Q8BJL0 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smarcal1Q8BJL0 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smarcal1Q8BJL0 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Smarcal1Q8BJL0 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC17.1■□□□□ 0.33
Smarcal1Q8BJL0 Gm24513-201ENSMUST00000174964 138 ntBASIC17.1■□□□□ 0.33
Smarcal1Q8BJL0 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC17.1■□□□□ 0.33
Smarcal1Q8BJL0 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC17.1■□□□□ 0.33
Smarcal1Q8BJL0 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smarcal1Q8BJL0 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smarcal1Q8BJL0 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smarcal1Q8BJL0 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Smarcal1Q8BJL0 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC17.1■□□□□ 0.33
Smarcal1Q8BJL0 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smarcal1Q8BJL0 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smarcal1Q8BJL0 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smarcal1Q8BJL0 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smarcal1Q8BJL0 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smarcal1Q8BJL0 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Smarcal1Q8BJL0 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Smarcal1Q8BJL0 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smarcal1Q8BJL0 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC17.09■□□□□ 0.33
Smarcal1Q8BJL0 Mir8117-201ENSMUST00000184773 107 ntBASIC17.09■□□□□ 0.33
Smarcal1Q8BJL0 Gm27397-201ENSMUST00000184997 107 ntBASIC17.09■□□□□ 0.33
Smarcal1Q8BJL0 Gm43575-201ENSMUST00000196420 516 ntBASIC17.09■□□□□ 0.33
Smarcal1Q8BJL0 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Smarcal1Q8BJL0 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC17.09■□□□□ 0.33
Smarcal1Q8BJL0 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smarcal1Q8BJL0 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC17.09■□□□□ 0.33
Smarcal1Q8BJL0 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Smarcal1Q8BJL0 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smarcal1Q8BJL0 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smarcal1Q8BJL0 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smarcal1Q8BJL0 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smarcal1Q8BJL0 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smarcal1Q8BJL0 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms