Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Chmp2bQ8BJF9 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Chmp2bQ8BJF9 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Chmp2bQ8BJF9 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC16.54■□□□□ 0.24
Chmp2bQ8BJF9 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Chmp2bQ8BJF9 Gm22240-201ENSMUST00000175225 82 ntBASIC16.54■□□□□ 0.24
Chmp2bQ8BJF9 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Chmp2bQ8BJF9 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Chmp2bQ8BJF9 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Chmp2bQ8BJF9 Gm5417-201ENSMUST00000079706 384 ntBASIC16.54■□□□□ 0.24
Chmp2bQ8BJF9 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Chmp2bQ8BJF9 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Chmp2bQ8BJF9 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Chmp2bQ8BJF9 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Chmp2bQ8BJF9 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Chmp2bQ8BJF9 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Chmp2bQ8BJF9 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Chmp2bQ8BJF9 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Chmp2bQ8BJF9 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Chmp2bQ8BJF9 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Chmp2bQ8BJF9 Prob1-201ENSMUST00000097619 3021 ntBASIC16.54■□□□□ 0.24
Chmp2bQ8BJF9 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Chmp2bQ8BJF9 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Chmp2bQ8BJF9 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Chmp2bQ8BJF9 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Chmp2bQ8BJF9 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Chmp2bQ8BJF9 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Chmp2bQ8BJF9 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Chmp2bQ8BJF9 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Chmp2bQ8BJF9 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC16.53■□□□□ 0.24
Chmp2bQ8BJF9 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Chmp2bQ8BJF9 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC16.53■□□□□ 0.24
Chmp2bQ8BJF9 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC16.53■□□□□ 0.24
Chmp2bQ8BJF9 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC16.53■□□□□ 0.24
Chmp2bQ8BJF9 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Chmp2bQ8BJF9 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Chmp2bQ8BJF9 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Chmp2bQ8BJF9 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Chmp2bQ8BJF9 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Chmp2bQ8BJF9 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Chmp2bQ8BJF9 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC16.53■□□□□ 0.24
Chmp2bQ8BJF9 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Chmp2bQ8BJF9 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Chmp2bQ8BJF9 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Chmp2bQ8BJF9 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Chmp2bQ8BJF9 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Chmp2bQ8BJF9 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC16.52■□□□□ 0.24
Chmp2bQ8BJF9 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Chmp2bQ8BJF9 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Chmp2bQ8BJF9 Gm14464-201ENSMUST00000119658 1254 ntBASIC16.52■□□□□ 0.24
Chmp2bQ8BJF9 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Chmp2bQ8BJF9 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC16.52■□□□□ 0.24
Chmp2bQ8BJF9 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC16.52■□□□□ 0.24
Chmp2bQ8BJF9 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC16.52■□□□□ 0.24
Chmp2bQ8BJF9 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Chmp2bQ8BJF9 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Chmp2bQ8BJF9 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Chmp2bQ8BJF9 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
Chmp2bQ8BJF9 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
Chmp2bQ8BJF9 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Chmp2bQ8BJF9 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC16.52■□□□□ 0.23
Chmp2bQ8BJF9 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC16.52■□□□□ 0.23
Chmp2bQ8BJF9 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Chmp2bQ8BJF9 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Chmp2bQ8BJF9 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chmp2bQ8BJF9 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chmp2bQ8BJF9 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chmp2bQ8BJF9 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chmp2bQ8BJF9 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC16.51■□□□□ 0.23
Chmp2bQ8BJF9 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Chmp2bQ8BJF9 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chmp2bQ8BJF9 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
Chmp2bQ8BJF9 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC16.51■□□□□ 0.23
Chmp2bQ8BJF9 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC16.51■□□□□ 0.23
Chmp2bQ8BJF9 Gm18421-201ENSMUST00000204122 625 ntBASIC16.51■□□□□ 0.23
Chmp2bQ8BJF9 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chmp2bQ8BJF9 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chmp2bQ8BJF9 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Chmp2bQ8BJF9 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Chmp2bQ8BJF9 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chmp2bQ8BJF9 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC16.51■□□□□ 0.23
Chmp2bQ8BJF9 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
Chmp2bQ8BJF9 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
Chmp2bQ8BJF9 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chmp2bQ8BJF9 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chmp2bQ8BJF9 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Chmp2bQ8BJF9 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chmp2bQ8BJF9 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chmp2bQ8BJF9 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chmp2bQ8BJF9 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chmp2bQ8BJF9 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC16.5■□□□□ 0.23
Chmp2bQ8BJF9 Ntrk2-205ENSMUST00000224402 2284 ntBASIC16.5■□□□□ 0.23
Chmp2bQ8BJF9 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chmp2bQ8BJF9 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chmp2bQ8BJF9 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chmp2bQ8BJF9 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Chmp2bQ8BJF9 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chmp2bQ8BJF9 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chmp2bQ8BJF9 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chmp2bQ8BJF9 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms