Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rnf38Q8BI21 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Rnf38Q8BI21 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Rnf38Q8BI21 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Rnf38Q8BI21 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC15.6■□□□□ 0.09
Rnf38Q8BI21 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Rnf38Q8BI21 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rnf38Q8BI21 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rnf38Q8BI21 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rnf38Q8BI21 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rnf38Q8BI21 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC15.6■□□□□ 0.09
Rnf38Q8BI21 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Rnf38Q8BI21 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rnf38Q8BI21 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC15.6■□□□□ 0.09
Rnf38Q8BI21 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Rnf38Q8BI21 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Rnf38Q8BI21 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Rnf38Q8BI21 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Rnf38Q8BI21 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rnf38Q8BI21 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rnf38Q8BI21 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rnf38Q8BI21 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Rnf38Q8BI21 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rnf38Q8BI21 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rnf38Q8BI21 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rnf38Q8BI21 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC15.6■□□□□ 0.09
Rnf38Q8BI21 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rnf38Q8BI21 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rnf38Q8BI21 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC15.59■□□□□ 0.09
Rnf38Q8BI21 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Rnf38Q8BI21 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Rnf38Q8BI21 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC15.59■□□□□ 0.09
Rnf38Q8BI21 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rnf38Q8BI21 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Rnf38Q8BI21 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Rnf38Q8BI21 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC15.59■□□□□ 0.09
Rnf38Q8BI21 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC15.59■□□□□ 0.09
Rnf38Q8BI21 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Rnf38Q8BI21 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC15.59■□□□□ 0.09
Rnf38Q8BI21 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Rnf38Q8BI21 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rnf38Q8BI21 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC15.59■□□□□ 0.09
Rnf38Q8BI21 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Rnf38Q8BI21 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rnf38Q8BI21 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rnf38Q8BI21 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rnf38Q8BI21 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rnf38Q8BI21 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC15.59■□□□□ 0.09
Rnf38Q8BI21 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC15.59■□□□□ 0.09
Rnf38Q8BI21 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.09
Rnf38Q8BI21 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Rnf38Q8BI21 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Rnf38Q8BI21 Gm44729-201ENSMUST00000206759 2052 ntBASIC15.58■□□□□ 0.09
Rnf38Q8BI21 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Rnf38Q8BI21 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
Rnf38Q8BI21 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC15.58■□□□□ 0.08
Rnf38Q8BI21 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rnf38Q8BI21 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Rnf38Q8BI21 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC15.58■□□□□ 0.08
Rnf38Q8BI21 Gm29994-201ENSMUST00000195495 1193 ntBASIC15.58■□□□□ 0.08
Rnf38Q8BI21 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
Rnf38Q8BI21 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Rnf38Q8BI21 Spsb2-203ENSMUST00000112473 1322 ntBASIC15.58■□□□□ 0.08
Rnf38Q8BI21 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rnf38Q8BI21 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rnf38Q8BI21 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC15.58■□□□□ 0.08
Rnf38Q8BI21 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Rnf38Q8BI21 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rnf38Q8BI21 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rnf38Q8BI21 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Rnf38Q8BI21 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rnf38Q8BI21 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Rnf38Q8BI21 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rnf38Q8BI21 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Rnf38Q8BI21 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Rnf38Q8BI21 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rnf38Q8BI21 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rnf38Q8BI21 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rnf38Q8BI21 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Rnf38Q8BI21 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Rnf38Q8BI21 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Rnf38Q8BI21 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC15.57■□□□□ 0.08
Rnf38Q8BI21 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rnf38Q8BI21 Gm15565-201ENSMUST00000118890 427 ntBASIC15.57■□□□□ 0.08
Rnf38Q8BI21 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC15.57■□□□□ 0.08
Rnf38Q8BI21 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC15.57■□□□□ 0.08
Rnf38Q8BI21 Gm36967-201ENSMUST00000193814 266 ntBASIC15.57■□□□□ 0.08
Rnf38Q8BI21 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rnf38Q8BI21 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Rnf38Q8BI21 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rnf38Q8BI21 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Rnf38Q8BI21 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rnf38Q8BI21 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rnf38Q8BI21 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rnf38Q8BI21 AC154412.1-201ENSMUST00000226540 2786 ntBASIC15.57■□□□□ 0.08
Rnf38Q8BI21 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC15.57■□□□□ 0.08
Rnf38Q8BI21 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Rnf38Q8BI21 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC15.57■□□□□ 0.08
Rnf38Q8BI21 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Rnf38Q8BI21 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms