Protein–RNA interactions for Protein: Q8BGY9

Slc5a7, High affinity choline transporter 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc5a7Q8BGY9 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Slc5a7Q8BGY9 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Slc5a7Q8BGY9 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Slc5a7Q8BGY9 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Slc5a7Q8BGY9 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Slc5a7Q8BGY9 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC14.18□□□□□ -0.14
Slc5a7Q8BGY9 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Slc5a7Q8BGY9 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Slc5a7Q8BGY9 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Slc5a7Q8BGY9 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Slc5a7Q8BGY9 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Slc5a7Q8BGY9 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Slc5a7Q8BGY9 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC14.18□□□□□ -0.14
Slc5a7Q8BGY9 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Slc5a7Q8BGY9 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC14.18□□□□□ -0.14
Slc5a7Q8BGY9 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Slc5a7Q8BGY9 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Slc5a7Q8BGY9 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Slc5a7Q8BGY9 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Slc5a7Q8BGY9 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Slc5a7Q8BGY9 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
Slc5a7Q8BGY9 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Slc5a7Q8BGY9 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Slc5a7Q8BGY9 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Slc5a7Q8BGY9 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Slc5a7Q8BGY9 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Slc5a7Q8BGY9 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Slc5a7Q8BGY9 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Slc5a7Q8BGY9 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Slc5a7Q8BGY9 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Slc5a7Q8BGY9 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Slc5a7Q8BGY9 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Slc5a7Q8BGY9 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Slc5a7Q8BGY9 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Slc5a7Q8BGY9 Gm37736-201ENSMUST00000193564 2802 ntBASIC14.17□□□□□ -0.14
Slc5a7Q8BGY9 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Slc5a7Q8BGY9 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Slc5a7Q8BGY9 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Slc5a7Q8BGY9 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Slc5a7Q8BGY9 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Slc5a7Q8BGY9 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
Slc5a7Q8BGY9 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Slc5a7Q8BGY9 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Slc5a7Q8BGY9 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Slc5a7Q8BGY9 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Slc5a7Q8BGY9 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Slc5a7Q8BGY9 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC14.17□□□□□ -0.14
Slc5a7Q8BGY9 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Slc5a7Q8BGY9 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Slc5a7Q8BGY9 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Slc5a7Q8BGY9 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Slc5a7Q8BGY9 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Slc5a7Q8BGY9 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Slc5a7Q8BGY9 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Slc5a7Q8BGY9 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Slc5a7Q8BGY9 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Slc5a7Q8BGY9 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC14.16□□□□□ -0.14
Slc5a7Q8BGY9 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC14.16□□□□□ -0.14
Slc5a7Q8BGY9 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Slc5a7Q8BGY9 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC14.16□□□□□ -0.14
Slc5a7Q8BGY9 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Slc5a7Q8BGY9 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Slc5a7Q8BGY9 Gm13158-201ENSMUST00000122007 736 ntBASIC14.16□□□□□ -0.14
Slc5a7Q8BGY9 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Slc5a7Q8BGY9 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC14.16□□□□□ -0.14
Slc5a7Q8BGY9 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Slc5a7Q8BGY9 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Slc5a7Q8BGY9 Mir5133-201ENSMUST00000174955 77 ntBASIC14.16□□□□□ -0.14
Slc5a7Q8BGY9 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC14.16□□□□□ -0.14
Slc5a7Q8BGY9 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Slc5a7Q8BGY9 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Slc5a7Q8BGY9 Gm9731-201ENSMUST00000209480 747 ntBASIC14.16□□□□□ -0.14
Slc5a7Q8BGY9 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC14.16□□□□□ -0.14
Slc5a7Q8BGY9 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Slc5a7Q8BGY9 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Slc5a7Q8BGY9 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Slc5a7Q8BGY9 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Slc5a7Q8BGY9 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Slc5a7Q8BGY9 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC14.16□□□□□ -0.14
Slc5a7Q8BGY9 Gm29340-201ENSMUST00000188763 3854 ntBASIC14.16□□□□□ -0.14
Slc5a7Q8BGY9 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC14.15□□□□□ -0.14
Slc5a7Q8BGY9 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Slc5a7Q8BGY9 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Slc5a7Q8BGY9 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Slc5a7Q8BGY9 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Slc5a7Q8BGY9 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Slc5a7Q8BGY9 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Slc5a7Q8BGY9 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Slc5a7Q8BGY9 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Slc5a7Q8BGY9 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Slc5a7Q8BGY9 Gm44443-201ENSMUST00000204396 5633 ntBASIC14.15□□□□□ -0.14
Slc5a7Q8BGY9 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Slc5a7Q8BGY9 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Slc5a7Q8BGY9 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Slc5a7Q8BGY9 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Slc5a7Q8BGY9 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Slc5a7Q8BGY9 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Slc5a7Q8BGY9 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Slc5a7Q8BGY9 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Slc5a7Q8BGY9 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 66.3 ms