Protein–RNA interactions for Protein: Q8BGX7

Spidr, DNA repair-scaffolding protein, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SpidrQ8BGX7 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
SpidrQ8BGX7 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SpidrQ8BGX7 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SpidrQ8BGX7 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SpidrQ8BGX7 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SpidrQ8BGX7 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC18.72■□□□□ 0.59
SpidrQ8BGX7 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SpidrQ8BGX7 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SpidrQ8BGX7 Gm8839-201ENSMUST00000121279 1645 ntBASIC18.72■□□□□ 0.59
SpidrQ8BGX7 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
SpidrQ8BGX7 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SpidrQ8BGX7 Gm4899-201ENSMUST00000178708 719 ntBASIC18.72■□□□□ 0.59
SpidrQ8BGX7 Gm27300-201ENSMUST00000184085 97 ntBASIC18.72■□□□□ 0.59
SpidrQ8BGX7 Gm27335-201ENSMUST00000184758 97 ntBASIC18.72■□□□□ 0.59
SpidrQ8BGX7 AC151286.1-201ENSMUST00000198489 145 ntBASIC18.72■□□□□ 0.59
SpidrQ8BGX7 Gm7229-201ENSMUST00000214719 1007 ntBASIC18.72■□□□□ 0.59
SpidrQ8BGX7 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SpidrQ8BGX7 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC18.72■□□□□ 0.59
SpidrQ8BGX7 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
SpidrQ8BGX7 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
SpidrQ8BGX7 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SpidrQ8BGX7 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SpidrQ8BGX7 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC18.72■□□□□ 0.59
SpidrQ8BGX7 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC18.72■□□□□ 0.59
SpidrQ8BGX7 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SpidrQ8BGX7 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC18.72■□□□□ 0.59
SpidrQ8BGX7 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
SpidrQ8BGX7 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SpidrQ8BGX7 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SpidrQ8BGX7 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
SpidrQ8BGX7 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.59
SpidrQ8BGX7 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
SpidrQ8BGX7 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
SpidrQ8BGX7 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
SpidrQ8BGX7 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SpidrQ8BGX7 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC18.71■□□□□ 0.59
SpidrQ8BGX7 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC18.71■□□□□ 0.59
SpidrQ8BGX7 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SpidrQ8BGX7 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
SpidrQ8BGX7 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SpidrQ8BGX7 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
SpidrQ8BGX7 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SpidrQ8BGX7 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SpidrQ8BGX7 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SpidrQ8BGX7 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SpidrQ8BGX7 Gm5648-201ENSMUST00000122244 1587 ntBASIC18.71■□□□□ 0.59
SpidrQ8BGX7 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
SpidrQ8BGX7 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SpidrQ8BGX7 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC18.71■□□□□ 0.59
SpidrQ8BGX7 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
SpidrQ8BGX7 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
SpidrQ8BGX7 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SpidrQ8BGX7 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SpidrQ8BGX7 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SpidrQ8BGX7 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC18.7■□□□□ 0.58
SpidrQ8BGX7 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SpidrQ8BGX7 Gm15358-201ENSMUST00000119249 520 ntBASIC18.7■□□□□ 0.58
SpidrQ8BGX7 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SpidrQ8BGX7 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
SpidrQ8BGX7 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC18.7■□□□□ 0.58
SpidrQ8BGX7 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SpidrQ8BGX7 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SpidrQ8BGX7 AC154621.1-201ENSMUST00000226155 1119 ntBASIC18.7■□□□□ 0.58
SpidrQ8BGX7 AC147366.1-201ENSMUST00000227671 852 ntBASIC18.7■□□□□ 0.58
SpidrQ8BGX7 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
SpidrQ8BGX7 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SpidrQ8BGX7 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SpidrQ8BGX7 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SpidrQ8BGX7 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SpidrQ8BGX7 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
SpidrQ8BGX7 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SpidrQ8BGX7 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
SpidrQ8BGX7 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SpidrQ8BGX7 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SpidrQ8BGX7 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SpidrQ8BGX7 Gm4913-201ENSMUST00000117075 1290 ntBASIC18.69■□□□□ 0.58
SpidrQ8BGX7 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC18.69■□□□□ 0.58
SpidrQ8BGX7 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC18.69■□□□□ 0.58
SpidrQ8BGX7 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SpidrQ8BGX7 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
SpidrQ8BGX7 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC18.69■□□□□ 0.58
SpidrQ8BGX7 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SpidrQ8BGX7 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SpidrQ8BGX7 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SpidrQ8BGX7 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SpidrQ8BGX7 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC18.68■□□□□ 0.58
SpidrQ8BGX7 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SpidrQ8BGX7 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
SpidrQ8BGX7 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC18.68■□□□□ 0.58
SpidrQ8BGX7 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SpidrQ8BGX7 Gm5253-201ENSMUST00000187104 1025 ntBASIC18.68■□□□□ 0.58
SpidrQ8BGX7 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC18.68■□□□□ 0.58
SpidrQ8BGX7 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SpidrQ8BGX7 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC18.68■□□□□ 0.58
SpidrQ8BGX7 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC18.68■□□□□ 0.58
SpidrQ8BGX7 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SpidrQ8BGX7 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SpidrQ8BGX7 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SpidrQ8BGX7 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SpidrQ8BGX7 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms