Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim6Q8BGE7 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim6Q8BGE7 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim6Q8BGE7 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim6Q8BGE7 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim6Q8BGE7 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Trim6Q8BGE7 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim6Q8BGE7 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Trim6Q8BGE7 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC17.15■□□□□ 0.34
Trim6Q8BGE7 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Trim6Q8BGE7 AC154855.1-201ENSMUST00000227353 1458 ntBASIC17.15■□□□□ 0.34
Trim6Q8BGE7 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim6Q8BGE7 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Trim6Q8BGE7 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC17.15■□□□□ 0.34
Trim6Q8BGE7 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim6Q8BGE7 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim6Q8BGE7 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim6Q8BGE7 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim6Q8BGE7 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim6Q8BGE7 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim6Q8BGE7 Gm6190-201ENSMUST00000220683 1374 ntBASIC17.15■□□□□ 0.34
Trim6Q8BGE7 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Trim6Q8BGE7 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim6Q8BGE7 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim6Q8BGE7 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim6Q8BGE7 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim6Q8BGE7 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim6Q8BGE7 Gfra2-202ENSMUST00000227633 1480 ntBASIC17.14■□□□□ 0.33
Trim6Q8BGE7 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim6Q8BGE7 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Trim6Q8BGE7 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Trim6Q8BGE7 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Trim6Q8BGE7 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim6Q8BGE7 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim6Q8BGE7 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC17.14■□□□□ 0.33
Trim6Q8BGE7 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Trim6Q8BGE7 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC17.14■□□□□ 0.33
Trim6Q8BGE7 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC17.14■□□□□ 0.33
Trim6Q8BGE7 AC156016.1-201ENSMUST00000227190 1035 ntBASIC17.14■□□□□ 0.33
Trim6Q8BGE7 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim6Q8BGE7 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim6Q8BGE7 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Trim6Q8BGE7 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim6Q8BGE7 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim6Q8BGE7 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim6Q8BGE7 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Trim6Q8BGE7 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim6Q8BGE7 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Trim6Q8BGE7 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Trim6Q8BGE7 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
Trim6Q8BGE7 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim6Q8BGE7 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Trim6Q8BGE7 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC17.14■□□□□ 0.33
Trim6Q8BGE7 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Trim6Q8BGE7 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Trim6Q8BGE7 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim6Q8BGE7 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim6Q8BGE7 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim6Q8BGE7 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC17.13■□□□□ 0.33
Trim6Q8BGE7 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim6Q8BGE7 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC17.13■□□□□ 0.33
Trim6Q8BGE7 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Trim6Q8BGE7 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC17.13■□□□□ 0.33
Trim6Q8BGE7 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC17.13■□□□□ 0.33
Trim6Q8BGE7 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim6Q8BGE7 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim6Q8BGE7 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Trim6Q8BGE7 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim6Q8BGE7 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Trim6Q8BGE7 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim6Q8BGE7 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
Trim6Q8BGE7 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC17.13■□□□□ 0.33
Trim6Q8BGE7 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim6Q8BGE7 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim6Q8BGE7 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim6Q8BGE7 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim6Q8BGE7 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim6Q8BGE7 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Trim6Q8BGE7 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim6Q8BGE7 Gm15039-201ENSMUST00000118914 875 ntBASIC17.12■□□□□ 0.33
Trim6Q8BGE7 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim6Q8BGE7 Gm20760-201ENSMUST00000179197 648 ntBASIC17.12■□□□□ 0.33
Trim6Q8BGE7 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim6Q8BGE7 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Trim6Q8BGE7 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim6Q8BGE7 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Trim6Q8BGE7 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim6Q8BGE7 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim6Q8BGE7 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Trim6Q8BGE7 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC17.12■□□□□ 0.33
Trim6Q8BGE7 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Trim6Q8BGE7 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim6Q8BGE7 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Trim6Q8BGE7 Actl10-202ENSMUST00000226583 1501 ntBASIC17.11■□□□□ 0.33
Trim6Q8BGE7 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim6Q8BGE7 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim6Q8BGE7 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trim6Q8BGE7 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim6Q8BGE7 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trim6Q8BGE7 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms