Protein–RNA interactions for Protein: Q810I2

Trim50, E3 ubiquitin-protein ligase TRIM50, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50Q810I2 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Trim50Q810I2 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trim50Q810I2 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trim50Q810I2 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trim50Q810I2 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trim50Q810I2 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trim50Q810I2 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trim50Q810I2 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim50Q810I2 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim50Q810I2 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim50Q810I2 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim50Q810I2 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim50Q810I2 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Trim50Q810I2 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim50Q810I2 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Trim50Q810I2 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim50Q810I2 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim50Q810I2 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
Trim50Q810I2 Gm10052-201ENSMUST00000168019 960 ntBASIC15.73■□□□□ 0.11
Trim50Q810I2 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC15.73■□□□□ 0.11
Trim50Q810I2 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trim50Q810I2 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC15.73■□□□□ 0.11
Trim50Q810I2 Gm7729-201ENSMUST00000050143 801 ntBASIC15.73■□□□□ 0.11
Trim50Q810I2 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim50Q810I2 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim50Q810I2 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Trim50Q810I2 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim50Q810I2 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trim50Q810I2 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim50Q810I2 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim50Q810I2 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC15.73■□□□□ 0.11
Trim50Q810I2 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trim50Q810I2 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim50Q810I2 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim50Q810I2 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim50Q810I2 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim50Q810I2 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim50Q810I2 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim50Q810I2 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim50Q810I2 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim50Q810I2 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC15.72■□□□□ 0.11
Trim50Q810I2 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim50Q810I2 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
Trim50Q810I2 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC15.72■□□□□ 0.11
Trim50Q810I2 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC15.72■□□□□ 0.11
Trim50Q810I2 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trim50Q810I2 Gm44430-201ENSMUST00000203376 995 ntBASIC15.72■□□□□ 0.11
Trim50Q810I2 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim50Q810I2 AC125350.1-201ENSMUST00000225115 903 ntBASIC15.72■□□□□ 0.11
Trim50Q810I2 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim50Q810I2 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim50Q810I2 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim50Q810I2 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trim50Q810I2 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Trim50Q810I2 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
Trim50Q810I2 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim50Q810I2 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC15.72■□□□□ 0.11
Trim50Q810I2 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Trim50Q810I2 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim50Q810I2 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim50Q810I2 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim50Q810I2 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC15.71■□□□□ 0.11
Trim50Q810I2 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim50Q810I2 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim50Q810I2 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC15.71■□□□□ 0.11
Trim50Q810I2 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim50Q810I2 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC15.71■□□□□ 0.11
Trim50Q810I2 Gm32996-201ENSMUST00000199828 1447 ntBASIC15.71■□□□□ 0.11
Trim50Q810I2 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Trim50Q810I2 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim50Q810I2 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim50Q810I2 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trim50Q810I2 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim50Q810I2 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trim50Q810I2 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Trim50Q810I2 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC15.71■□□□□ 0.11
Trim50Q810I2 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Trim50Q810I2 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim50Q810I2 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Trim50Q810I2 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trim50Q810I2 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trim50Q810I2 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim50Q810I2 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trim50Q810I2 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
Trim50Q810I2 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim50Q810I2 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim50Q810I2 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim50Q810I2 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim50Q810I2 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC15.7■□□□□ 0.1
Trim50Q810I2 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim50Q810I2 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Trim50Q810I2 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
Trim50Q810I2 Gm45328-201ENSMUST00000210942 917 ntBASIC15.7■□□□□ 0.1
Trim50Q810I2 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim50Q810I2 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trim50Q810I2 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim50Q810I2 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Trim50Q810I2 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim50Q810I2 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Trim50Q810I2 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms