Protein–RNA interactions for Protein: Q80YF6

Upk3b, Uroplakin-3b, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bQ80YF6 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Upk3bQ80YF6 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Upk3bQ80YF6 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Upk3bQ80YF6 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Upk3bQ80YF6 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Upk3bQ80YF6 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Upk3bQ80YF6 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Upk3bQ80YF6 Phf7-203ENSMUST00000226565 1971 ntBASIC13.66□□□□□ -0.22
Upk3bQ80YF6 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC13.66□□□□□ -0.22
Upk3bQ80YF6 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC13.66□□□□□ -0.22
Upk3bQ80YF6 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Upk3bQ80YF6 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Upk3bQ80YF6 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Upk3bQ80YF6 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
Upk3bQ80YF6 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Upk3bQ80YF6 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Upk3bQ80YF6 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Upk3bQ80YF6 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Upk3bQ80YF6 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Upk3bQ80YF6 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Upk3bQ80YF6 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Upk3bQ80YF6 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Upk3bQ80YF6 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Upk3bQ80YF6 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Upk3bQ80YF6 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Upk3bQ80YF6 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Upk3bQ80YF6 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Upk3bQ80YF6 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Upk3bQ80YF6 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Upk3bQ80YF6 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
Upk3bQ80YF6 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Upk3bQ80YF6 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Upk3bQ80YF6 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Upk3bQ80YF6 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
Upk3bQ80YF6 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Upk3bQ80YF6 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC13.65□□□□□ -0.22
Upk3bQ80YF6 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC13.65□□□□□ -0.22
Upk3bQ80YF6 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Upk3bQ80YF6 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Upk3bQ80YF6 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Upk3bQ80YF6 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC13.65□□□□□ -0.22
Upk3bQ80YF6 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Upk3bQ80YF6 Odf3b-204ENSMUST00000227834 930 ntBASIC13.65□□□□□ -0.22
Upk3bQ80YF6 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Upk3bQ80YF6 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Upk3bQ80YF6 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Upk3bQ80YF6 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Upk3bQ80YF6 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Upk3bQ80YF6 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Upk3bQ80YF6 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Upk3bQ80YF6 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Upk3bQ80YF6 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Upk3bQ80YF6 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Upk3bQ80YF6 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Upk3bQ80YF6 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Upk3bQ80YF6 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC13.65□□□□□ -0.23
Upk3bQ80YF6 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Upk3bQ80YF6 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Upk3bQ80YF6 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC13.64□□□□□ -0.23
Upk3bQ80YF6 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Upk3bQ80YF6 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Upk3bQ80YF6 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Upk3bQ80YF6 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Upk3bQ80YF6 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC13.64□□□□□ -0.23
Upk3bQ80YF6 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC13.64□□□□□ -0.23
Upk3bQ80YF6 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Upk3bQ80YF6 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Upk3bQ80YF6 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Upk3bQ80YF6 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Upk3bQ80YF6 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Upk3bQ80YF6 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Upk3bQ80YF6 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Upk3bQ80YF6 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC13.64□□□□□ -0.23
Upk3bQ80YF6 Otx2os1-204ENSMUST00000227221 751 ntBASIC13.64□□□□□ -0.23
Upk3bQ80YF6 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Upk3bQ80YF6 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Upk3bQ80YF6 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Upk3bQ80YF6 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Upk3bQ80YF6 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Upk3bQ80YF6 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Upk3bQ80YF6 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Upk3bQ80YF6 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Upk3bQ80YF6 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
Upk3bQ80YF6 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Upk3bQ80YF6 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Upk3bQ80YF6 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Upk3bQ80YF6 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Upk3bQ80YF6 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Upk3bQ80YF6 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Upk3bQ80YF6 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Upk3bQ80YF6 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Upk3bQ80YF6 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Upk3bQ80YF6 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Upk3bQ80YF6 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC13.63□□□□□ -0.23
Upk3bQ80YF6 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Upk3bQ80YF6 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Upk3bQ80YF6 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Upk3bQ80YF6 Ccdc166-201ENSMUST00000182172 2584 ntBASIC13.63□□□□□ -0.23
Upk3bQ80YF6 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC13.63□□□□□ -0.23
Upk3bQ80YF6 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms