Protein–RNA interactions for Protein: Q80WV7

Srrm3, Serine/arginine repetitive matrix protein 3, mousemouse

Predictions only

Length 648 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm3Q80WV7 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC16.84■□□□□ 0.29
Srrm3Q80WV7 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC16.84■□□□□ 0.29
Srrm3Q80WV7 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC16.84■□□□□ 0.29
Srrm3Q80WV7 Gm4974-201ENSMUST00000209974 875 ntBASIC16.84■□□□□ 0.29
Srrm3Q80WV7 AC133598.3-202ENSMUST00000224219 531 ntBASIC16.84■□□□□ 0.29
Srrm3Q80WV7 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Srrm3Q80WV7 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Srrm3Q80WV7 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Srrm3Q80WV7 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Srrm3Q80WV7 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Srrm3Q80WV7 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Srrm3Q80WV7 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Srrm3Q80WV7 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Srrm3Q80WV7 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Srrm3Q80WV7 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Srrm3Q80WV7 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Srrm3Q80WV7 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Srrm3Q80WV7 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Srrm3Q80WV7 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Srrm3Q80WV7 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Srrm3Q80WV7 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
Srrm3Q80WV7 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Srrm3Q80WV7 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC16.83■□□□□ 0.28
Srrm3Q80WV7 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC16.83■□□□□ 0.28
Srrm3Q80WV7 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Srrm3Q80WV7 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC16.83■□□□□ 0.28
Srrm3Q80WV7 AC159205.6-201ENSMUST00000224935 887 ntBASIC16.83■□□□□ 0.28
Srrm3Q80WV7 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Srrm3Q80WV7 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Srrm3Q80WV7 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC16.83■□□□□ 0.28
Srrm3Q80WV7 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Srrm3Q80WV7 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Srrm3Q80WV7 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Srrm3Q80WV7 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Srrm3Q80WV7 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Srrm3Q80WV7 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Srrm3Q80WV7 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Srrm3Q80WV7 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Srrm3Q80WV7 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Srrm3Q80WV7 Gm10584-201ENSMUST00000207036 2628 ntBASIC16.82■□□□□ 0.28
Srrm3Q80WV7 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Srrm3Q80WV7 Gm27000-201ENSMUST00000182943 842 ntBASIC16.82■□□□□ 0.28
Srrm3Q80WV7 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Srrm3Q80WV7 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC16.82■□□□□ 0.28
Srrm3Q80WV7 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Srrm3Q80WV7 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Srrm3Q80WV7 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Srrm3Q80WV7 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Srrm3Q80WV7 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Srrm3Q80WV7 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Srrm3Q80WV7 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Srrm3Q80WV7 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Srrm3Q80WV7 Gm45560-201ENSMUST00000211492 1472 ntBASIC16.81■□□□□ 0.28
Srrm3Q80WV7 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Srrm3Q80WV7 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Srrm3Q80WV7 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Srrm3Q80WV7 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Srrm3Q80WV7 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC16.81■□□□□ 0.28
Srrm3Q80WV7 AC166341.7-201ENSMUST00000221698 126 ntBASIC16.81■□□□□ 0.28
Srrm3Q80WV7 Odf3b-204ENSMUST00000227834 930 ntBASIC16.81■□□□□ 0.28
Srrm3Q80WV7 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Srrm3Q80WV7 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Srrm3Q80WV7 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Srrm3Q80WV7 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Srrm3Q80WV7 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Srrm3Q80WV7 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Srrm3Q80WV7 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
Srrm3Q80WV7 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Srrm3Q80WV7 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Srrm3Q80WV7 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Srrm3Q80WV7 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Srrm3Q80WV7 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Srrm3Q80WV7 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Srrm3Q80WV7 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Srrm3Q80WV7 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Srrm3Q80WV7 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Srrm3Q80WV7 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Srrm3Q80WV7 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Srrm3Q80WV7 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Srrm3Q80WV7 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Srrm3Q80WV7 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Srrm3Q80WV7 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Srrm3Q80WV7 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Srrm3Q80WV7 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Srrm3Q80WV7 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Srrm3Q80WV7 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Srrm3Q80WV7 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
Srrm3Q80WV7 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC16.8■□□□□ 0.28
Srrm3Q80WV7 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Srrm3Q80WV7 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC16.8■□□□□ 0.28
Srrm3Q80WV7 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Srrm3Q80WV7 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Srrm3Q80WV7 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Srrm3Q80WV7 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
Srrm3Q80WV7 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Srrm3Q80WV7 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Srrm3Q80WV7 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Srrm3Q80WV7 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Srrm3Q80WV7 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Srrm3Q80WV7 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms