Protein–RNA interactions for Protein: Q7M729

Scn4b, Sodium channel subunit beta-4, mousemouse

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn4bQ7M729 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Scn4bQ7M729 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Scn4bQ7M729 Gm25016-201ENSMUST00000158399 131 ntBASIC15.73■□□□□ 0.11
Scn4bQ7M729 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Scn4bQ7M729 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Scn4bQ7M729 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Scn4bQ7M729 Gm32996-201ENSMUST00000199828 1447 ntBASIC15.73■□□□□ 0.11
Scn4bQ7M729 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Scn4bQ7M729 Gm42918-201ENSMUST00000199249 1580 ntBASIC15.73■□□□□ 0.11
Scn4bQ7M729 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Scn4bQ7M729 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Scn4bQ7M729 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Scn4bQ7M729 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Scn4bQ7M729 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Scn4bQ7M729 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC15.73■□□□□ 0.11
Scn4bQ7M729 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Scn4bQ7M729 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Scn4bQ7M729 Dancr-204ENSMUST00000132389 2347 ntBASIC15.72■□□□□ 0.11
Scn4bQ7M729 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Scn4bQ7M729 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Scn4bQ7M729 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Scn4bQ7M729 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC15.72■□□□□ 0.11
Scn4bQ7M729 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Scn4bQ7M729 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Scn4bQ7M729 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
Scn4bQ7M729 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
Scn4bQ7M729 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC15.72■□□□□ 0.11
Scn4bQ7M729 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Scn4bQ7M729 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC15.72■□□□□ 0.11
Scn4bQ7M729 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
Scn4bQ7M729 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Scn4bQ7M729 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Scn4bQ7M729 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Scn4bQ7M729 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Scn4bQ7M729 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Scn4bQ7M729 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Scn4bQ7M729 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Scn4bQ7M729 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Scn4bQ7M729 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Scn4bQ7M729 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Scn4bQ7M729 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.11
Scn4bQ7M729 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Scn4bQ7M729 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Scn4bQ7M729 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Scn4bQ7M729 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Scn4bQ7M729 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Scn4bQ7M729 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Scn4bQ7M729 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Scn4bQ7M729 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Scn4bQ7M729 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Scn4bQ7M729 AA414768-201ENSMUST00000121924 1257 ntBASIC15.71■□□□□ 0.11
Scn4bQ7M729 Gm6623-201ENSMUST00000173570 544 ntBASIC15.71■□□□□ 0.11
Scn4bQ7M729 Gm6728-201ENSMUST00000178117 1065 ntBASIC15.71■□□□□ 0.11
Scn4bQ7M729 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC15.71■□□□□ 0.11
Scn4bQ7M729 Gm7977-201ENSMUST00000193787 748 ntBASIC15.71■□□□□ 0.11
Scn4bQ7M729 Gm5587-201ENSMUST00000206270 674 ntBASIC15.71■□□□□ 0.11
Scn4bQ7M729 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Scn4bQ7M729 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Scn4bQ7M729 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Scn4bQ7M729 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Scn4bQ7M729 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Scn4bQ7M729 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Scn4bQ7M729 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Scn4bQ7M729 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Scn4bQ7M729 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Scn4bQ7M729 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
Scn4bQ7M729 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Scn4bQ7M729 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Scn4bQ7M729 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Scn4bQ7M729 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Scn4bQ7M729 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Scn4bQ7M729 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Scn4bQ7M729 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Scn4bQ7M729 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Scn4bQ7M729 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Scn4bQ7M729 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Scn4bQ7M729 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Scn4bQ7M729 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC15.7■□□□□ 0.1
Scn4bQ7M729 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Scn4bQ7M729 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Scn4bQ7M729 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Scn4bQ7M729 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Scn4bQ7M729 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Scn4bQ7M729 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Scn4bQ7M729 Gm10052-201ENSMUST00000168019 960 ntBASIC15.7■□□□□ 0.1
Scn4bQ7M729 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Scn4bQ7M729 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Scn4bQ7M729 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Scn4bQ7M729 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC15.7■□□□□ 0.1
Scn4bQ7M729 Gm7729-201ENSMUST00000050143 801 ntBASIC15.7■□□□□ 0.1
Scn4bQ7M729 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Scn4bQ7M729 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Scn4bQ7M729 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Scn4bQ7M729 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Scn4bQ7M729 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Scn4bQ7M729 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Scn4bQ7M729 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC15.7■□□□□ 0.1
Scn4bQ7M729 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC15.7■□□□□ 0.1
Scn4bQ7M729 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Scn4bQ7M729 Gm8258-201ENSMUST00000055593 1449 ntBASIC15.69■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms