Protein–RNA interactions for Protein: Q78PY7

Snd1, Staphylococcal nuclease domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snd1Q78PY7 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Snd1Q78PY7 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Snd1Q78PY7 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Snd1Q78PY7 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Snd1Q78PY7 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Snd1Q78PY7 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Snd1Q78PY7 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Snd1Q78PY7 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Snd1Q78PY7 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Snd1Q78PY7 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Snd1Q78PY7 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
Snd1Q78PY7 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Snd1Q78PY7 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Snd1Q78PY7 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Snd1Q78PY7 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
Snd1Q78PY7 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Snd1Q78PY7 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC17.62■□□□□ 0.41
Snd1Q78PY7 Gm11539-201ENSMUST00000119837 557 ntBASIC17.62■□□□□ 0.41
Snd1Q78PY7 Gm13436-201ENSMUST00000120418 567 ntBASIC17.62■□□□□ 0.41
Snd1Q78PY7 Gm13559-201ENSMUST00000120476 863 ntBASIC17.62■□□□□ 0.41
Snd1Q78PY7 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Snd1Q78PY7 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC17.62■□□□□ 0.41
Snd1Q78PY7 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Snd1Q78PY7 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Snd1Q78PY7 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Snd1Q78PY7 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC17.62■□□□□ 0.41
Snd1Q78PY7 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Snd1Q78PY7 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Snd1Q78PY7 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Snd1Q78PY7 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Snd1Q78PY7 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
Snd1Q78PY7 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Snd1Q78PY7 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC17.61■□□□□ 0.41
Snd1Q78PY7 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC17.61■□□□□ 0.41
Snd1Q78PY7 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Snd1Q78PY7 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC17.61■□□□□ 0.41
Snd1Q78PY7 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Snd1Q78PY7 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Snd1Q78PY7 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Snd1Q78PY7 Gm27463-201ENSMUST00000183569 57 ntBASIC17.61■□□□□ 0.41
Snd1Q78PY7 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Snd1Q78PY7 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Snd1Q78PY7 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Snd1Q78PY7 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Snd1Q78PY7 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Snd1Q78PY7 Ccdc166-201ENSMUST00000182172 2584 ntBASIC17.61■□□□□ 0.41
Snd1Q78PY7 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Snd1Q78PY7 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Snd1Q78PY7 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Snd1Q78PY7 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC17.61■□□□□ 0.41
Snd1Q78PY7 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Snd1Q78PY7 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Snd1Q78PY7 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Snd1Q78PY7 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Snd1Q78PY7 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Snd1Q78PY7 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Snd1Q78PY7 Gm27000-201ENSMUST00000182943 842 ntBASIC17.6■□□□□ 0.41
Snd1Q78PY7 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Snd1Q78PY7 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Snd1Q78PY7 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Snd1Q78PY7 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Snd1Q78PY7 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Snd1Q78PY7 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Snd1Q78PY7 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Snd1Q78PY7 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Snd1Q78PY7 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
Snd1Q78PY7 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Snd1Q78PY7 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Snd1Q78PY7 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Snd1Q78PY7 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Snd1Q78PY7 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Snd1Q78PY7 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Snd1Q78PY7 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Snd1Q78PY7 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Snd1Q78PY7 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC17.59■□□□□ 0.41
Snd1Q78PY7 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Snd1Q78PY7 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Snd1Q78PY7 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC17.59■□□□□ 0.41
Snd1Q78PY7 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Snd1Q78PY7 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
Snd1Q78PY7 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Snd1Q78PY7 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC17.59■□□□□ 0.41
Snd1Q78PY7 Il3ra-202ENSMUST00000223589 738 ntBASIC17.59■□□□□ 0.41
Snd1Q78PY7 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Snd1Q78PY7 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Snd1Q78PY7 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Snd1Q78PY7 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Snd1Q78PY7 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC17.59■□□□□ 0.41
Snd1Q78PY7 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Snd1Q78PY7 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Snd1Q78PY7 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
Snd1Q78PY7 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Snd1Q78PY7 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
Snd1Q78PY7 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Snd1Q78PY7 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Snd1Q78PY7 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Snd1Q78PY7 Gm7889-201ENSMUST00000185591 958 ntBASIC17.58■□□□□ 0.4
Snd1Q78PY7 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC17.58■□□□□ 0.4
Snd1Q78PY7 AC120002.2-201ENSMUST00000220205 773 ntBASIC17.58■□□□□ 0.4
Snd1Q78PY7 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms