Protein–RNA interactions for Protein: Q6ZWR6

Syne1, Nesprin-1, mousemouse

Predictions only

Length 8,799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne1Q6ZWR6 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Syne1Q6ZWR6 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Syne1Q6ZWR6 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Syne1Q6ZWR6 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Syne1Q6ZWR6 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC5.49□□□□□ -1.53
Syne1Q6ZWR6 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
Syne1Q6ZWR6 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Syne1Q6ZWR6 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Syne1Q6ZWR6 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
Syne1Q6ZWR6 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Syne1Q6ZWR6 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Syne1Q6ZWR6 Rprl3-201ENSMUST00000157400 290 ntBASIC5.49□□□□□ -1.53
Syne1Q6ZWR6 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC5.49□□□□□ -1.53
Syne1Q6ZWR6 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Syne1Q6ZWR6 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Syne1Q6ZWR6 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Syne1Q6ZWR6 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Syne1Q6ZWR6 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Syne1Q6ZWR6 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Syne1Q6ZWR6 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC5.49□□□□□ -1.53
Syne1Q6ZWR6 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Syne1Q6ZWR6 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC5.49□□□□□ -1.53
Syne1Q6ZWR6 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
Syne1Q6ZWR6 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
Syne1Q6ZWR6 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Syne1Q6ZWR6 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Syne1Q6ZWR6 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Syne1Q6ZWR6 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC5.49□□□□□ -1.53
Syne1Q6ZWR6 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Syne1Q6ZWR6 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Syne1Q6ZWR6 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Syne1Q6ZWR6 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
Syne1Q6ZWR6 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Syne1Q6ZWR6 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Syne1Q6ZWR6 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Syne1Q6ZWR6 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC5.49□□□□□ -1.53
Syne1Q6ZWR6 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Syne1Q6ZWR6 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Syne1Q6ZWR6 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Syne1Q6ZWR6 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Syne1Q6ZWR6 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Syne1Q6ZWR6 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC5.49□□□□□ -1.53
Syne1Q6ZWR6 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Syne1Q6ZWR6 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Syne1Q6ZWR6 AC154222.1-201ENSMUST00000223882 475 ntBASIC5.49□□□□□ -1.53
Syne1Q6ZWR6 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Syne1Q6ZWR6 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Syne1Q6ZWR6 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
Syne1Q6ZWR6 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC5.48□□□□□ -1.53
Syne1Q6ZWR6 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Syne1Q6ZWR6 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Syne1Q6ZWR6 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Syne1Q6ZWR6 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Syne1Q6ZWR6 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Syne1Q6ZWR6 Gm15442-201ENSMUST00000117905 1527 ntBASIC5.48□□□□□ -1.53
Syne1Q6ZWR6 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC5.48□□□□□ -1.53
Syne1Q6ZWR6 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Syne1Q6ZWR6 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
Syne1Q6ZWR6 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC5.48□□□□□ -1.53
Syne1Q6ZWR6 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC5.48□□□□□ -1.53
Syne1Q6ZWR6 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Syne1Q6ZWR6 Gm15743-202ENSMUST00000182690 1901 ntBASIC5.48□□□□□ -1.53
Syne1Q6ZWR6 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Syne1Q6ZWR6 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Syne1Q6ZWR6 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Syne1Q6ZWR6 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Syne1Q6ZWR6 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Syne1Q6ZWR6 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Syne1Q6ZWR6 Gm12260-201ENSMUST00000122447 411 ntBASIC5.48□□□□□ -1.53
Syne1Q6ZWR6 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Syne1Q6ZWR6 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Syne1Q6ZWR6 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC5.48□□□□□ -1.53
Syne1Q6ZWR6 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
Syne1Q6ZWR6 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Syne1Q6ZWR6 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
Syne1Q6ZWR6 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
Syne1Q6ZWR6 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC5.48□□□□□ -1.53
Syne1Q6ZWR6 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC5.48□□□□□ -1.53
Syne1Q6ZWR6 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Syne1Q6ZWR6 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC5.48□□□□□ -1.53
Syne1Q6ZWR6 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC5.48□□□□□ -1.53
Syne1Q6ZWR6 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Syne1Q6ZWR6 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC5.48□□□□□ -1.53
Syne1Q6ZWR6 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Syne1Q6ZWR6 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Syne1Q6ZWR6 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Syne1Q6ZWR6 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
Syne1Q6ZWR6 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Syne1Q6ZWR6 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Syne1Q6ZWR6 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC5.48□□□□□ -1.53
Syne1Q6ZWR6 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Syne1Q6ZWR6 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Syne1Q6ZWR6 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Syne1Q6ZWR6 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
Syne1Q6ZWR6 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC5.48□□□□□ -1.53
Syne1Q6ZWR6 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Syne1Q6ZWR6 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Syne1Q6ZWR6 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
Syne1Q6ZWR6 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Syne1Q6ZWR6 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms