Protein–RNA interactions for Protein: Q6T3U4

Npc1l1, Niemann-Pick C1-like protein 1, mousemouse

Predictions only

Length 1,333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1l1Q6T3U4 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Npc1l1Q6T3U4 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC19.29■□□□□ 0.68
Npc1l1Q6T3U4 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Npc1l1Q6T3U4 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Npc1l1Q6T3U4 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Npc1l1Q6T3U4 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Npc1l1Q6T3U4 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Npc1l1Q6T3U4 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Npc1l1Q6T3U4 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Npc1l1Q6T3U4 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Npc1l1Q6T3U4 Gm25406-201ENSMUST00000157599 105 ntBASIC19.28■□□□□ 0.68
Npc1l1Q6T3U4 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC19.28■□□□□ 0.68
Npc1l1Q6T3U4 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC19.28■□□□□ 0.68
Npc1l1Q6T3U4 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Npc1l1Q6T3U4 Gm9172-201ENSMUST00000212092 954 ntBASIC19.28■□□□□ 0.68
Npc1l1Q6T3U4 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC19.28■□□□□ 0.68
Npc1l1Q6T3U4 Rbfox2-207ENSMUST00000227533 1041 ntBASIC19.28■□□□□ 0.68
Npc1l1Q6T3U4 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Npc1l1Q6T3U4 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Npc1l1Q6T3U4 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Npc1l1Q6T3U4 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC19.28■□□□□ 0.68
Npc1l1Q6T3U4 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Npc1l1Q6T3U4 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Npc1l1Q6T3U4 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Npc1l1Q6T3U4 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC19.28■□□□□ 0.68
Npc1l1Q6T3U4 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Npc1l1Q6T3U4 Gm37166-201ENSMUST00000195473 2474 ntBASIC19.28■□□□□ 0.68
Npc1l1Q6T3U4 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Npc1l1Q6T3U4 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Npc1l1Q6T3U4 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Npc1l1Q6T3U4 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Npc1l1Q6T3U4 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Npc1l1Q6T3U4 Gm11594-201ENSMUST00000122313 162 ntBASIC19.27■□□□□ 0.68
Npc1l1Q6T3U4 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC19.27■□□□□ 0.68
Npc1l1Q6T3U4 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Npc1l1Q6T3U4 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Npc1l1Q6T3U4 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Npc1l1Q6T3U4 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Npc1l1Q6T3U4 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC19.27■□□□□ 0.68
Npc1l1Q6T3U4 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Npc1l1Q6T3U4 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Npc1l1Q6T3U4 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Npc1l1Q6T3U4 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC19.27■□□□□ 0.68
Npc1l1Q6T3U4 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Npc1l1Q6T3U4 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Npc1l1Q6T3U4 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Npc1l1Q6T3U4 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Npc1l1Q6T3U4 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Npc1l1Q6T3U4 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
Npc1l1Q6T3U4 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Npc1l1Q6T3U4 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Npc1l1Q6T3U4 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Npc1l1Q6T3U4 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC19.26■□□□□ 0.67
Npc1l1Q6T3U4 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC19.26■□□□□ 0.67
Npc1l1Q6T3U4 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Npc1l1Q6T3U4 Gm25745-201ENSMUST00000174945 133 ntBASIC19.26■□□□□ 0.67
Npc1l1Q6T3U4 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Npc1l1Q6T3U4 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Npc1l1Q6T3U4 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Npc1l1Q6T3U4 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
Npc1l1Q6T3U4 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Npc1l1Q6T3U4 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Npc1l1Q6T3U4 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Npc1l1Q6T3U4 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Npc1l1Q6T3U4 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Npc1l1Q6T3U4 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Npc1l1Q6T3U4 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Npc1l1Q6T3U4 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Npc1l1Q6T3U4 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Npc1l1Q6T3U4 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Npc1l1Q6T3U4 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Npc1l1Q6T3U4 Gm43332-201ENSMUST00000202511 1044 ntBASIC19.25■□□□□ 0.67
Npc1l1Q6T3U4 Gm5364-201ENSMUST00000216789 889 ntBASIC19.25■□□□□ 0.67
Npc1l1Q6T3U4 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Npc1l1Q6T3U4 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Npc1l1Q6T3U4 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Npc1l1Q6T3U4 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Npc1l1Q6T3U4 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Npc1l1Q6T3U4 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Npc1l1Q6T3U4 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Npc1l1Q6T3U4 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Npc1l1Q6T3U4 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Npc1l1Q6T3U4 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC19.25■□□□□ 0.67
Npc1l1Q6T3U4 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Npc1l1Q6T3U4 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Npc1l1Q6T3U4 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Npc1l1Q6T3U4 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Npc1l1Q6T3U4 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Npc1l1Q6T3U4 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Npc1l1Q6T3U4 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Npc1l1Q6T3U4 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC19.24■□□□□ 0.67
Npc1l1Q6T3U4 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Npc1l1Q6T3U4 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Npc1l1Q6T3U4 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Npc1l1Q6T3U4 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Npc1l1Q6T3U4 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Npc1l1Q6T3U4 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Npc1l1Q6T3U4 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Npc1l1Q6T3U4 Mir5126-201ENSMUST00000175513 77 ntBASIC19.24■□□□□ 0.67
Npc1l1Q6T3U4 Gm8000-201ENSMUST00000188378 592 ntBASIC19.24■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 60.2 ms