Protein–RNA interactions for Protein: Q6QIY3

Scn10a, Sodium channel protein type 10 subunit alpha, mousemouse

Predictions only

Length 1,958 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn10aQ6QIY3 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Scn10aQ6QIY3 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Scn10aQ6QIY3 AC140397.2-201ENSMUST00000224213 834 ntBASIC18.16■□□□□ 0.5
Scn10aQ6QIY3 AC126408.1-201ENSMUST00000225184 523 ntBASIC18.16■□□□□ 0.5
Scn10aQ6QIY3 Gpr146-202ENSMUST00000053120 1040 ntBASIC18.16■□□□□ 0.5
Scn10aQ6QIY3 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Scn10aQ6QIY3 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Scn10aQ6QIY3 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Scn10aQ6QIY3 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Scn10aQ6QIY3 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Scn10aQ6QIY3 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC18.16■□□□□ 0.5
Scn10aQ6QIY3 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC18.15■□□□□ 0.5
Scn10aQ6QIY3 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Scn10aQ6QIY3 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Scn10aQ6QIY3 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Scn10aQ6QIY3 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Scn10aQ6QIY3 Mir449b-201ENSMUST00000104833 80 ntBASIC18.15■□□□□ 0.5
Scn10aQ6QIY3 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC18.15■□□□□ 0.5
Scn10aQ6QIY3 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Scn10aQ6QIY3 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC18.15■□□□□ 0.5
Scn10aQ6QIY3 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC18.15■□□□□ 0.5
Scn10aQ6QIY3 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Scn10aQ6QIY3 Fgf17-202ENSMUST00000227123 1336 ntBASIC18.15■□□□□ 0.5
Scn10aQ6QIY3 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Scn10aQ6QIY3 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
Scn10aQ6QIY3 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Scn10aQ6QIY3 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Scn10aQ6QIY3 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Scn10aQ6QIY3 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Scn10aQ6QIY3 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Scn10aQ6QIY3 Nudt18-203ENSMUST00000228768 1578 ntBASIC18.14■□□□□ 0.5
Scn10aQ6QIY3 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Scn10aQ6QIY3 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC18.14■□□□□ 0.49
Scn10aQ6QIY3 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Scn10aQ6QIY3 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
Scn10aQ6QIY3 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Scn10aQ6QIY3 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC18.14■□□□□ 0.49
Scn10aQ6QIY3 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Scn10aQ6QIY3 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Scn10aQ6QIY3 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Scn10aQ6QIY3 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Scn10aQ6QIY3 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Scn10aQ6QIY3 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Scn10aQ6QIY3 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Scn10aQ6QIY3 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Scn10aQ6QIY3 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Scn10aQ6QIY3 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Scn10aQ6QIY3 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Scn10aQ6QIY3 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Scn10aQ6QIY3 Gm16198-201ENSMUST00000118766 670 ntBASIC18.13■□□□□ 0.49
Scn10aQ6QIY3 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC18.13■□□□□ 0.49
Scn10aQ6QIY3 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC18.13■□□□□ 0.49
Scn10aQ6QIY3 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC18.13■□□□□ 0.49
Scn10aQ6QIY3 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Scn10aQ6QIY3 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Scn10aQ6QIY3 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Scn10aQ6QIY3 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Scn10aQ6QIY3 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Scn10aQ6QIY3 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC18.13■□□□□ 0.49
Scn10aQ6QIY3 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Scn10aQ6QIY3 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Scn10aQ6QIY3 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Scn10aQ6QIY3 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Scn10aQ6QIY3 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Scn10aQ6QIY3 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Scn10aQ6QIY3 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC18.13■□□□□ 0.49
Scn10aQ6QIY3 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Scn10aQ6QIY3 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Scn10aQ6QIY3 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Scn10aQ6QIY3 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC18.12■□□□□ 0.49
Scn10aQ6QIY3 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Scn10aQ6QIY3 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Scn10aQ6QIY3 Gm9385-201ENSMUST00000117563 472 ntBASIC18.12■□□□□ 0.49
Scn10aQ6QIY3 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC18.12■□□□□ 0.49
Scn10aQ6QIY3 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC18.12■□□□□ 0.49
Scn10aQ6QIY3 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC18.12■□□□□ 0.49
Scn10aQ6QIY3 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Scn10aQ6QIY3 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC18.12■□□□□ 0.49
Scn10aQ6QIY3 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Scn10aQ6QIY3 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Scn10aQ6QIY3 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Scn10aQ6QIY3 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC18.12■□□□□ 0.49
Scn10aQ6QIY3 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Scn10aQ6QIY3 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Scn10aQ6QIY3 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC18.12■□□□□ 0.49
Scn10aQ6QIY3 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Scn10aQ6QIY3 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC18.11■□□□□ 0.49
Scn10aQ6QIY3 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Scn10aQ6QIY3 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Scn10aQ6QIY3 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Scn10aQ6QIY3 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Scn10aQ6QIY3 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Scn10aQ6QIY3 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Scn10aQ6QIY3 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
Scn10aQ6QIY3 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Scn10aQ6QIY3 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Scn10aQ6QIY3 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
Scn10aQ6QIY3 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC18.11■□□□□ 0.49
Scn10aQ6QIY3 Gm16401-202ENSMUST00000197463 2074 ntBASIC18.11■□□□□ 0.49
Scn10aQ6QIY3 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms