Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Gm7619-201ENSMUST00000210649 1282 ntBASIC13.55□□□□□ -0.24
Rif1Q6PR54 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rif1Q6PR54 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rif1Q6PR54 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Rif1Q6PR54 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC13.55□□□□□ -0.24
Rif1Q6PR54 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rif1Q6PR54 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC13.55□□□□□ -0.24
Rif1Q6PR54 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Rif1Q6PR54 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC13.55□□□□□ -0.24
Rif1Q6PR54 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rif1Q6PR54 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rif1Q6PR54 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Rif1Q6PR54 Gpr146-202ENSMUST00000053120 1040 ntBASIC13.55□□□□□ -0.24
Rif1Q6PR54 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rif1Q6PR54 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rif1Q6PR54 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rif1Q6PR54 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Rif1Q6PR54 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rif1Q6PR54 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC13.54□□□□□ -0.24
Rif1Q6PR54 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rif1Q6PR54 Wdyhv1-203ENSMUST00000226889 394 ntBASIC13.54□□□□□ -0.24
Rif1Q6PR54 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rif1Q6PR54 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Rif1Q6PR54 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rif1Q6PR54 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rif1Q6PR54 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rif1Q6PR54 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rif1Q6PR54 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rif1Q6PR54 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rif1Q6PR54 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rif1Q6PR54 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rif1Q6PR54 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rif1Q6PR54 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rif1Q6PR54 Syt7-205ENSMUST00000224135 1557 ntBASIC13.54□□□□□ -0.24
Rif1Q6PR54 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rif1Q6PR54 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC13.54□□□□□ -0.24
Rif1Q6PR54 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC13.54□□□□□ -0.24
Rif1Q6PR54 Gm22065-201ENSMUST00000103753 110 ntBASIC13.54□□□□□ -0.24
Rif1Q6PR54 Gm22066-201ENSMUST00000103761 110 ntBASIC13.54□□□□□ -0.24
Rif1Q6PR54 Gm24932-201ENSMUST00000103763 110 ntBASIC13.54□□□□□ -0.24
Rif1Q6PR54 Gm24115-201ENSMUST00000103799 110 ntBASIC13.54□□□□□ -0.24
Rif1Q6PR54 Gm22190-201ENSMUST00000103827 110 ntBASIC13.54□□□□□ -0.24
Rif1Q6PR54 Gm22191-201ENSMUST00000103831 110 ntBASIC13.54□□□□□ -0.24
Rif1Q6PR54 Gm24721-201ENSMUST00000103849 110 ntBASIC13.54□□□□□ -0.24
Rif1Q6PR54 Gm28018-201ENSMUST00000103869 110 ntBASIC13.54□□□□□ -0.24
Rif1Q6PR54 Gm26399-201ENSMUST00000103937 110 ntBASIC13.54□□□□□ -0.24
Rif1Q6PR54 Gm11425-201ENSMUST00000119608 498 ntBASIC13.54□□□□□ -0.24
Rif1Q6PR54 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC13.54□□□□□ -0.24
Rif1Q6PR54 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rif1Q6PR54 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC13.54□□□□□ -0.24
Rif1Q6PR54 Gm25349-201ENSMUST00000177728 110 ntBASIC13.54□□□□□ -0.24
Rif1Q6PR54 Gm23616-201ENSMUST00000177797 110 ntBASIC13.54□□□□□ -0.24
Rif1Q6PR54 Gm25871-201ENSMUST00000177816 110 ntBASIC13.54□□□□□ -0.24
Rif1Q6PR54 Gm24752-201ENSMUST00000178240 110 ntBASIC13.54□□□□□ -0.24
Rif1Q6PR54 Gm24496-201ENSMUST00000178287 110 ntBASIC13.54□□□□□ -0.24
Rif1Q6PR54 Gm25649-201ENSMUST00000178476 110 ntBASIC13.54□□□□□ -0.24
Rif1Q6PR54 Gm25548-201ENSMUST00000178681 110 ntBASIC13.54□□□□□ -0.24
Rif1Q6PR54 Gm23147-201ENSMUST00000178841 110 ntBASIC13.54□□□□□ -0.24
Rif1Q6PR54 Gm26095-201ENSMUST00000179270 110 ntBASIC13.54□□□□□ -0.24
Rif1Q6PR54 Gm22171-201ENSMUST00000179283 110 ntBASIC13.54□□□□□ -0.24
Rif1Q6PR54 Gm23936-201ENSMUST00000179354 110 ntBASIC13.54□□□□□ -0.24
Rif1Q6PR54 Gm22619-201ENSMUST00000179516 110 ntBASIC13.54□□□□□ -0.24
Rif1Q6PR54 Gm25255-201ENSMUST00000179579 110 ntBASIC13.54□□□□□ -0.24
Rif1Q6PR54 Gm24755-201ENSMUST00000179691 110 ntBASIC13.54□□□□□ -0.24
Rif1Q6PR54 Gm26506-201ENSMUST00000179692 110 ntBASIC13.54□□□□□ -0.24
Rif1Q6PR54 Gm25086-201ENSMUST00000179931 110 ntBASIC13.54□□□□□ -0.24
Rif1Q6PR54 Gm23243-201ENSMUST00000180047 110 ntBASIC13.54□□□□□ -0.24
Rif1Q6PR54 Gm24659-201ENSMUST00000180212 110 ntBASIC13.54□□□□□ -0.24
Rif1Q6PR54 Gm24169-201ENSMUST00000180244 110 ntBASIC13.54□□□□□ -0.24
Rif1Q6PR54 Gm23689-201ENSMUST00000180354 110 ntBASIC13.54□□□□□ -0.24
Rif1Q6PR54 Gm7507-201ENSMUST00000183053 1008 ntBASIC13.54□□□□□ -0.24
Rif1Q6PR54 Gm27359-201ENSMUST00000184153 110 ntBASIC13.54□□□□□ -0.24
Rif1Q6PR54 Gm27785-201ENSMUST00000184268 110 ntBASIC13.54□□□□□ -0.24
Rif1Q6PR54 Gm27466-201ENSMUST00000184396 110 ntBASIC13.54□□□□□ -0.24
Rif1Q6PR54 Gm27703-201ENSMUST00000184836 110 ntBASIC13.54□□□□□ -0.24
Rif1Q6PR54 Gm37153-201ENSMUST00000193637 231 ntBASIC13.54□□□□□ -0.24
Rif1Q6PR54 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC13.54□□□□□ -0.24
Rif1Q6PR54 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rif1Q6PR54 Gm9396-201ENSMUST00000076703 567 ntBASIC13.54□□□□□ -0.24
Rif1Q6PR54 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rif1Q6PR54 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC13.54□□□□□ -0.24
Rif1Q6PR54 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Rif1Q6PR54 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rif1Q6PR54 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rif1Q6PR54 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rif1Q6PR54 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rif1Q6PR54 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rif1Q6PR54 Gm37374-201ENSMUST00000194954 1829 ntBASIC13.54□□□□□ -0.24
Rif1Q6PR54 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Rif1Q6PR54 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC13.54□□□□□ -0.24
Rif1Q6PR54 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rif1Q6PR54 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC13.54□□□□□ -0.24
Rif1Q6PR54 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rif1Q6PR54 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Rif1Q6PR54 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rif1Q6PR54 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rif1Q6PR54 Gm15487-201ENSMUST00000122373 465 ntBASIC13.53□□□□□ -0.24
Rif1Q6PR54 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC13.53□□□□□ -0.24
Rif1Q6PR54 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC13.53□□□□□ -0.24
Rif1Q6PR54 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms