Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Chd4Q6PDQ2 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Chd4Q6PDQ2 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Chd4Q6PDQ2 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
Chd4Q6PDQ2 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Chd4Q6PDQ2 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Chd4Q6PDQ2 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Chd4Q6PDQ2 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Chd4Q6PDQ2 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC20.92■□□□□ 0.94
Chd4Q6PDQ2 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Chd4Q6PDQ2 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Chd4Q6PDQ2 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Chd4Q6PDQ2 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Chd4Q6PDQ2 Gm7787-201ENSMUST00000216858 688 ntBASIC20.92■□□□□ 0.94
Chd4Q6PDQ2 AC159295.1-201ENSMUST00000225326 940 ntBASIC20.92■□□□□ 0.94
Chd4Q6PDQ2 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Chd4Q6PDQ2 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC20.92■□□□□ 0.94
Chd4Q6PDQ2 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Chd4Q6PDQ2 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Chd4Q6PDQ2 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Chd4Q6PDQ2 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Chd4Q6PDQ2 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Chd4Q6PDQ2 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Chd4Q6PDQ2 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Chd4Q6PDQ2 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Chd4Q6PDQ2 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Chd4Q6PDQ2 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Chd4Q6PDQ2 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Chd4Q6PDQ2 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC20.91■□□□□ 0.94
Chd4Q6PDQ2 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Chd4Q6PDQ2 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC20.91■□□□□ 0.94
Chd4Q6PDQ2 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Chd4Q6PDQ2 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Chd4Q6PDQ2 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Chd4Q6PDQ2 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Chd4Q6PDQ2 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Chd4Q6PDQ2 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Chd4Q6PDQ2 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Chd4Q6PDQ2 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Chd4Q6PDQ2 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Chd4Q6PDQ2 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Chd4Q6PDQ2 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Chd4Q6PDQ2 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Chd4Q6PDQ2 Gm45747-201ENSMUST00000212203 999 ntBASIC20.9■□□□□ 0.94
Chd4Q6PDQ2 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Chd4Q6PDQ2 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Chd4Q6PDQ2 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Chd4Q6PDQ2 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Chd4Q6PDQ2 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Chd4Q6PDQ2 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC20.9■□□□□ 0.94
Chd4Q6PDQ2 Gm45774-201ENSMUST00000211992 2665 ntBASIC20.9■□□□□ 0.94
Chd4Q6PDQ2 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Chd4Q6PDQ2 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Chd4Q6PDQ2 Gm43125-201ENSMUST00000201724 730 ntBASIC20.9■□□□□ 0.94
Chd4Q6PDQ2 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Chd4Q6PDQ2 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
Chd4Q6PDQ2 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Chd4Q6PDQ2 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Chd4Q6PDQ2 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Chd4Q6PDQ2 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Chd4Q6PDQ2 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Chd4Q6PDQ2 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Chd4Q6PDQ2 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Chd4Q6PDQ2 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC20.89■□□□□ 0.93
Chd4Q6PDQ2 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC20.89■□□□□ 0.93
Chd4Q6PDQ2 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC20.89■□□□□ 0.93
Chd4Q6PDQ2 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Chd4Q6PDQ2 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Chd4Q6PDQ2 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Chd4Q6PDQ2 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Chd4Q6PDQ2 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Chd4Q6PDQ2 AC122024.2-201ENSMUST00000220086 871 ntBASIC20.88■□□□□ 0.93
Chd4Q6PDQ2 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Chd4Q6PDQ2 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Chd4Q6PDQ2 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Chd4Q6PDQ2 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Chd4Q6PDQ2 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC20.88■□□□□ 0.93
Chd4Q6PDQ2 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Chd4Q6PDQ2 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Chd4Q6PDQ2 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC20.88■□□□□ 0.93
Chd4Q6PDQ2 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Chd4Q6PDQ2 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Chd4Q6PDQ2 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Chd4Q6PDQ2 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Chd4Q6PDQ2 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Chd4Q6PDQ2 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Chd4Q6PDQ2 Gm27301-201ENSMUST00000184012 127 ntBASIC20.87■□□□□ 0.93
Chd4Q6PDQ2 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Chd4Q6PDQ2 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Chd4Q6PDQ2 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Chd4Q6PDQ2 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Chd4Q6PDQ2 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Chd4Q6PDQ2 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
Chd4Q6PDQ2 Gm18489-201ENSMUST00000172565 551 ntBASIC20.86■□□□□ 0.93
Chd4Q6PDQ2 Gm7286-201ENSMUST00000182691 1007 ntBASIC20.86■□□□□ 0.93
Chd4Q6PDQ2 Gm27494-201ENSMUST00000184735 189 ntBASIC20.86■□□□□ 0.93
Chd4Q6PDQ2 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Chd4Q6PDQ2 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Chd4Q6PDQ2 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Chd4Q6PDQ2 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms